| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2557 |
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| Symbol | |
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| ID | 7970034 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 2698512 |
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| End bp | 2698865 |
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| Gene Length | 354 bp |
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| Protein Length | 117 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644793144 |
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| Product | LrgA family protein |
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| Protein accession | YP_002944449 |
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| Protein GI | 239815539 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1380] Putative effector of murein hydrolase LrgA |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0686612 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCTACG CCATCACCAC GCTCTTTCTT TGCCAACTGG CCGGCGAACT GCTCGTGCAG
TGGCTGGGCT TGCCGATTCC CGGCCCGCTG ATCGGCATGC TGCTGCTGTT CATCGTGCTG
CTCGTGCGCG GCGGCGTGCC CGAGGCGCTG AACGAGACCT CGGGCCATCT GCTGCGCAAC
CTCATGCTGC TGTTCATTCC CGCGGTGACC GGCGTCATGC TGCATTTCGA ACGGGTGGGG
CGCGAATGGC TTCCGTTCCT TGCGGCGGGC ATCGTGGGCG CGGCCTTCAC CATGGCCGTG
ACCGCGCTCA CCTTGCGCTG GATGATCCGC ATCACCGGCA AGGATGCCGA ATGA
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| Protein sequence | MLYAITTLFL CQLAGELLVQ WLGLPIPGPL IGMLLLFIVL LVRGGVPEAL NETSGHLLRN
LMLLFIPAVT GVMLHFERVG REWLPFLAAG IVGAAFTMAV TALTLRWMIR ITGKDAE
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