| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2391 |
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| Symbol | |
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| ID | 7970434 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 2553011 |
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| End bp | 2553394 |
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| Gene Length | 384 bp |
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| Protein Length | 127 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644792973 |
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| Product | putative transcription regulator with HTH domain |
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| Protein accession | YP_002944284 |
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| Protein GI | 239815374 |
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| COG category | [K] Transcription |
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| COG ID | [COG5499] Predicted transcription regulator containing HTH domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGAAGTCA GAGCCATCCG CACCGATGCC GACTACCGCG CGGCGCTGCG CGAGGTGTCT
GCACTGATCG ACCTCGATCC TGATCGCGAA TCGCCCGAGG GTGAACGTCT CGAAGTGATC
GGCACGCTGG TGCAAGCTTA CGAAGCCGAG CACTACCCCG TCGACCCGCC CGATCCCATC
GAGGCGATCC GCTTCCGCAT GGAGCAGTCG GGTTTGGGAG TGCGCGACCT CGTGCCATAC
ATCGGCCCGC TGAACCGCGT CTACGAAGTG CTCGCGCGCA AGCGCCCGCT GACGCTGCAC
ATGATTCGCC GCCTCAACAA GGGTTTGGGC ATTCCGGCCG ACGTGCTCAT TGGCCAAGAG
CGAAATGCGC CCATCGCGGC CTGA
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| Protein sequence | MEVRAIRTDA DYRAALREVS ALIDLDPDRE SPEGERLEVI GTLVQAYEAE HYPVDPPDPI
EAIRFRMEQS GLGVRDLVPY IGPLNRVYEV LARKRPLTLH MIRRLNKGLG IPADVLIGQE
RNAPIAA
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