Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_2355 |
Symbol | |
ID | 7970398 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 2518444 |
End bp | 2519058 |
Gene Length | 615 bp |
Protein Length | 204 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644792937 |
Product | transcriptional regulator, TetR family |
Protein accession | YP_002944248 |
Protein GI | 239815338 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.284642 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCATCG CGACTGAAAA ACCAGCCCTT GAGGCCGCCT CCGCAGAGCC GGCCCACGAG CACTACGCCC GGCTGCTGGA AGGCATGGCG CGCGCCGTGG CCGCCAAGGG CTACGCGGAC ACCACCATTG CCGACATCGT GCGCGAGGCC GCCGTGTCGC GCCGCACCTT CTACGAGCAT TTCACGACCA AGTCGGAGTG CCTGATCGCG CTGTACGAGG CAGCCAGCAA GCTGGCGCTG CGCGCGGTGA GCGAAGCCTT CGATCCGGCC CAGCCCTGGC ATGCGCAGGT GGAGCGGGCG ATCACCGCGT ATTTCGACTA CCTTGCGCAG GATCCGGCGC TGCTGCGCAC ACTGTTCGTC GAGATCCTCG GCCTGGGCAT GCCGGGGCTG GCGGCGCGGC GCCGGGTGAA CGGCGAAATC GCCGGCTTCA TCCAGGCGGC CATCAACAAC GGCCCCGCGG CGCACCTGAC GAGCGAAATG GCGATGACCG TGGTGGGCGG CATCAACGAA CTGGTGCTGC AGGCCATCGA ACAGGACCGG GTGGGTGAGC TCGGCCAGCT GGTGCCGCCG GCCACGCGCC TGGTGCGCGC GGTGGCGGCG GAGAGCGCCA GGTAG
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Protein sequence | MSIATEKPAL EAASAEPAHE HYARLLEGMA RAVAAKGYAD TTIADIVREA AVSRRTFYEH FTTKSECLIA LYEAASKLAL RAVSEAFDPA QPWHAQVERA ITAYFDYLAQ DPALLRTLFV EILGLGMPGL AARRRVNGEI AGFIQAAINN GPAAHLTSEM AMTVVGGINE LVLQAIEQDR VGELGQLVPP ATRLVRAVAA ESAR
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