| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2280 |
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| Symbol | |
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| ID | 7971135 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 2423007 |
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| End bp | 2423462 |
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| Gene Length | 456 bp |
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| Protein Length | 151 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644792862 |
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| Product | surface presentation of antigens (SPOA) protein |
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| Protein accession | YP_002944175 |
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| Protein GI | 239815265 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1886] Flagellar motor switch/type III secretory pathway protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.515185 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCCAAG CCTTGGAAGG AATCACCACC GACAACCGCG TCGGTGCATC CACCGGCGCA
GTCGAAACGC GTGGCGAGAG CAGGGCGCGC GTTGCGCAAG GCCCGGGCAG CCTGCCCACC
GCGCAGATCA TCGCGCTGCC GGATCTGCAT GCCGGCGCCG AGGGCGATGC CGCCAACCAG
GGTGGCGATG CGTCGATCCT CAAGGACTGG AATCCGCTTC ACCAGATCAA GGCCAGGCTG
CAGGTCTGCG TGGGCGCGGT CAGCCTTTCG GTCGGCGAAC TGCTCGGTGC CAAGGAGCAC
CAGGTGCTGC GGCTCGACCG GGAGATCGAT CACCCGGTGG ACCTGACCAT CGAGGGCAAG
GTGGTCGCGC GCGGCCAGCT GGTGGCGGTC GACGGGCACT TTGCGGTTCG CATCACCGAA
CTGCCGGTGG CGCTGGGCCT GGCTTCGGGA AGCTGA
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| Protein sequence | MTQALEGITT DNRVGASTGA VETRGESRAR VAQGPGSLPT AQIIALPDLH AGAEGDAANQ
GGDASILKDW NPLHQIKARL QVCVGAVSLS VGELLGAKEH QVLRLDREID HPVDLTIEGK
VVARGQLVAV DGHFAVRITE LPVALGLASG S
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