Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_2131 |
Symbol | |
ID | 7973817 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 2275940 |
End bp | 2277988 |
Gene Length | 2049 bp |
Protein Length | 682 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644792718 |
Product | acetyl-CoA carboxylase, biotin carboxylase |
Protein accession | YP_002944032 |
Protein GI | 239815122 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG4770] Acetyl/propionyl-CoA carboxylase, alpha subunit |
TIGRFAM ID | [TIGR00514] acetyl-CoA carboxylase, biotin carboxylase subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTCAAGA AGATACTGAT CGCCAACCGC GGCGAAATCG CCTGCCGTGT GATCCAGACC GCGAAGAAGA TGGGCATCCT CACCGTCGCG GTCTACTCCG ACGCCGACAA GGAAGCCCGC CACGTCGAGC TGGCCGACGA GGCCGTGCAC ATCGGTGCCG CGCCCAGCCG CGAGAGCTAC CTGCAAGCGG ACCGCATCAT CGCGGCCTGC AAGCAGACGG GCGCCGAGGC GGTGCACCCG GGCTACGGCT TTCTGTCGGA GAACGAAGCC TTCGCGCGCA AGGTCGAGGA AGAGGGCATT GCCTTCATCG GACCCAAGCA CTATTCGATC GCGGCCATGG GCGACAAGAT CGCCTCCAAG AAGCTCGCGA ACGAGGCCAA GGTCAACACC ATCCCGGGCT GGAACGACGC CATCGAGACG GCCGAGCGCG CGGTCGAGAT CGCCAAGGAC ATCGGCTACC CGGTGATGAT CAAGGCCTCG GCCGGCGGCG GCGGCAAGGG CCTGCGCGTG GCCTACAACG ACAAGGAGGC CTTCGAGGGC TTCACCTCGT GCCGCAACGA GGCACTGAGC AGCTTCGGCG ACGACCGCGT GTTCATCGAG AAGTTCGTCG AGGAGCCGCG CCACATCGAG ATCCAGGTGC TGGGCGATTC CCACGGCAAC GTCATCTACC TGAACGAGCG CGAATGCTCG ATCCAGCGCC GCCACCAGAA GGTGATCGAG GAGGCGCCTT CGCCGTTCAT CAGCGACGCC ACGCGCCGTG CGATGGGCGA GCAGGCGGTG CAGTTGGCCA AGGCCGTGAA GTACCAGAGC GCGGGCACGG TGGAGTTCGT GGTCGGCAAG GACCAGAGCT TCTACTTTCT GGAGATGAAC ACGCGGCTGC AGGTGGAGCA CCCGGTGACC GAATGCATCA CGGGGCTCGA TCTTGTCGAG CTGATGATCC GCGTGGCGGC CGGCGAGGAA CTGCCGCTCA CGCAGGAACA GGTGAAGCGC AACGGCTGGG CCATCGAGTG CCGCATCAAT GCCGAGGACC CGTTCCGCAA TTTCCTGCCT TCGACCGGCC GCCTCGTGAA GTTCCAGCCG CCGGCCGAGA CCATGTTCGC AGCCGACACC GAGCGCCTGA ACGGCGTGCG CGTGGACACC GGCGTGTACG ACGGCGGCGA GATCCCGATG TACTACGACT CGATGATCGC CAAGCTCATC GTGCACGGCA AGGATCGCCA GCATGCGATT GCCCGCATGC GAGAGGCGCT CAACGGCTTC GTGATCCGCG GCATCAGCAG CAACATCCCG TTCCAGGCCG CGCTGCTCGC GCATCCGAAG TTCGTGGCGG GCGATTTCAA CACCGGCTTC ATCGCCGAGC ACTACGGCAA GGGCTTCCAT GCGGAAGACG TGCCGCACGC CGATCCGGCT TTCCTGATTG CGCTTGCGGC CTATGTGCAC CGCCGCTATC GCGCGCGGGC CTCCGGCATC AGCGGACAGC TCGAAGGCCA CGGCGTGAAG GTGGGCGAGC AGTTCGTGGT GGTGGAGCTG GGGCCGGAGG GCAAGCATGT GCACCATCCG GTGTCGGTCA CCGACTTCCA TGGCAAGACC GGCGCCAGCG CCGTGGCCGT GGGCGGCAAG AGCTACAAGA TCGACAGCGG CTTTGCGCTC GGCGCCATTC GCGTGCAGGG CATGGTCAAC GACCGGCCCT TCACCGCGCA GGTCGAGCGC GGTGCCGGCA AGAACCCGCT GGCGCTGCGC GTGTCCCACG ACGGCACGCA GATCGAGGCG ATGGTGCTGT CGCCCCTGGG TGCGCGCCTG CTCGAGCTGA TGCCCTACAA GGCCCCGCCC GACCTGAGCA AGTTCCTGAT GTCGCCCATG CCGGGCCTGT TGGTCGAGGT GTCGGTGCAG CCGGGGCAGC AGGTGCGCGC CGGCGAGAAG CTGGCCGTGA TCGAGGCCAT GAAGATGGAG AACGTGCTGT TCGCCACGCA AGACGGCGTG GTCGGCAAAA TTTCGGCCAA CAAGGGCGAG TCGCTCGCGG TCGATCAAAT TATTCTGGAG TTCAACTGA
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Protein sequence | MFKKILIANR GEIACRVIQT AKKMGILTVA VYSDADKEAR HVELADEAVH IGAAPSRESY LQADRIIAAC KQTGAEAVHP GYGFLSENEA FARKVEEEGI AFIGPKHYSI AAMGDKIASK KLANEAKVNT IPGWNDAIET AERAVEIAKD IGYPVMIKAS AGGGGKGLRV AYNDKEAFEG FTSCRNEALS SFGDDRVFIE KFVEEPRHIE IQVLGDSHGN VIYLNERECS IQRRHQKVIE EAPSPFISDA TRRAMGEQAV QLAKAVKYQS AGTVEFVVGK DQSFYFLEMN TRLQVEHPVT ECITGLDLVE LMIRVAAGEE LPLTQEQVKR NGWAIECRIN AEDPFRNFLP STGRLVKFQP PAETMFAADT ERLNGVRVDT GVYDGGEIPM YYDSMIAKLI VHGKDRQHAI ARMREALNGF VIRGISSNIP FQAALLAHPK FVAGDFNTGF IAEHYGKGFH AEDVPHADPA FLIALAAYVH RRYRARASGI SGQLEGHGVK VGEQFVVVEL GPEGKHVHHP VSVTDFHGKT GASAVAVGGK SYKIDSGFAL GAIRVQGMVN DRPFTAQVER GAGKNPLALR VSHDGTQIEA MVLSPLGARL LELMPYKAPP DLSKFLMSPM PGLLVEVSVQ PGQQVRAGEK LAVIEAMKME NVLFATQDGV VGKISANKGE SLAVDQIILE FN
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