Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_1878 |
Symbol | |
ID | 7971057 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | - |
Start bp | 2010673 |
End bp | 2010885 |
Gene Length | 213 bp |
Protein Length | 70 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 644792480 |
Product | transcriptional regulator, XRE family |
Protein accession | YP_002943794 |
Protein GI | 239814884 |
COG category | [K] Transcription |
COG ID | [COG1476] Predicted transcriptional regulators |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGATTTCAC TGTCCGTTCG ATTCGGGAAA CGTCTGCGGG AGCTCCGCAA AGAACGCGAT CTTTCGCAAG AAGAATTCGC GGCTCACTGC GGCCTTGACC GTACCTACGT CAGTGGAATG GAACGCGGCG TGCGAAACCC CTCCCTCGCG GTGATCGAGA CCCTGGCAGG CGCTTTGGGA ATCCGCGTCG AGGAGTTGTT CAGAGGACTG TAG
|
Protein sequence | MISLSVRFGK RLRELRKERD LSQEEFAAHC GLDRTYVSGM ERGVRNPSLA VIETLAGALG IRVEELFRGL
|
| |