Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_1867 |
Symbol | |
ID | 7971618 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | - |
Start bp | 1999023 |
End bp | 1999949 |
Gene Length | 927 bp |
Protein Length | 308 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644792468 |
Product | protein of unknown function DUF6 transmembrane |
Protein accession | YP_002943783 |
Protein GI | 239814873 |
COG category | [R] General function prediction only |
COG ID | [COG5006] Predicted permease, DMT superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAACACCG CTGCTCCCGC CAGCCGCCTG CTGGCCTATG GTTGCCTGGC CCTGAGCATG TCGCTCGTCG GCGGCTACGT CGCCCTCTCC AAGCCGCTGG TGGCGGCCTT CCCGGTGCTG TTGCTCGCCT GGCTGCGCTT CGGCATCGCG GCGCTCGCCA TGCCGCACTG GCTGCGGCGC GCTCCGGGCG AACCGCCGAT GAGTGCACGC ACGCGCGGGC TGGTCTTTCT CGAATCGTTC CTCGGCAACT TCCTGTTCTC GATCTGCATG CTGTTCGGCG TGAGCCTGAC CAGCGCGGTG TCCGCCGGCG TGATCATGGC TTCGATCCCG GCGGCCGTGG CGGTGGCGAG CTGGCTCTTC CTGCGCGAGC GCATCACGGT GCGCATCGGC CTGGCCATAG GCTGCGCTGC GATCGGCATC GGCCTGCTGG CCCTGACGCC CGCGCATGCA CCGGCAGCGG GCGACAACGG CGCCGCCGCG CCTTCGATGC CTTGGCTCGG CAATCTGCTC GTGTTCTGCG CGGTGCTGTG CGAAACCGCC TATGCGGTGA TCGGCAAGTC GCTCACCGGC CGGCTCGGCC CCAAGCGGAT CTCCTCGCTC ATCAACCTCT GGGGCTTCGT GCTGTCGATG CCCTTCGGCA TCTGGTTTGC GCTGCAGTTC GACTTCACGG CGGTGCGCCT CGGAACCTGG GCACTGCTCG TGGTCTATGC GCTGGCCGCG AGCATCTGGA CCGTGTGGCT CTGGATGACC GGATTGCGCC ATGTGCCCGC TGCGCAAGCG GGCGTGTTTG CCGTGATGCT GCCCGTGAGC GCGGCCCTCG TGGGCGTGCT GGTGCTCGGC GAAAGCCTCT CCGCGGCGCA GCTGCTTGCG TTCGCTCTTG CACTCGTTGG CGTGGTGCTG GCGACCTGGC CCGCGCGCCG AAGCTGA
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Protein sequence | MNTAAPASRL LAYGCLALSM SLVGGYVALS KPLVAAFPVL LLAWLRFGIA ALAMPHWLRR APGEPPMSAR TRGLVFLESF LGNFLFSICM LFGVSLTSAV SAGVIMASIP AAVAVASWLF LRERITVRIG LAIGCAAIGI GLLALTPAHA PAAGDNGAAA PSMPWLGNLL VFCAVLCETA YAVIGKSLTG RLGPKRISSL INLWGFVLSM PFGIWFALQF DFTAVRLGTW ALLVVYALAA SIWTVWLWMT GLRHVPAAQA GVFAVMLPVS AALVGVLVLG ESLSAAQLLA FALALVGVVL ATWPARRS
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