| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1855 |
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| Symbol | |
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| ID | 7970872 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 1985874 |
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| End bp | 1986971 |
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| Gene Length | 1098 bp |
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| Protein Length | 365 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644792456 |
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| Product | protein of unknown function DUF1006 |
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| Protein accession | YP_002943771 |
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| Protein GI | 239814861 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3214] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.476103 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCACCC CGACCCTCGA CGACCTGCGC CGCTACGCCA TCGCGCGCAC CCTCTTCAAG
CCGACCACGC TGCCGGGCGC GATCCGCCGG CTCGGCTTCG TTCAGGCCGA CCCGATCCGC
GCCCCTGCGC GCGCACAAGA CCTGACCTTG CGCCACCGCG TGAAGGACTA CCGCGCGGGC
GATCTCGAAA GCCGCTACAC CCGACTTGCC ATTGAGGAAG ACTGCCTCGT CAACTACGGC
TTTCTGCCGC GCGAGCACCT GGCGCTGATG CATCCGCGCG AAGCCAGGCA GCCCTGGGAC
GCGGACACCC GCCGCAAGGC CGCCGACGTG CTGGCCTTCG TGCGCGAGCG CGGGCCCGTG
CATCCGCGTG AAGTCGAACA GCACTTTGCA CACGGCAGCG TCAAGAACTA CTGGGGCGGC
TCGAGCAATG CGACGACGCG GCTGCTCGAT GGCCTGCACT ACCGCGGCAT GCTGCGCGTG
GTGCGGCGCG ACAGCGGCAC GCGCGTCTAC GAGGCCGTGA CACATGTGCC CGCCGACGAC
AGCCCCGCCG GCCGCGCGCA GCGCGCCGCC GCGCTGATCG ACCTGGTGGT GCGCAAGTAC
GCGCCGCTGC CGGCCGCGAG CCTGACGTAC CTCGTGCGGC TGCTCGGCTA CGGCGCGCCG
CATCTGTCGG CGCAGACGCA GGCCGCGCTG CGCCTCGCAC GCGACGAACG GCTCGCAAGC
TGCCGCATCG ACGGCACCAC CTGGTACTGG CCCGGCGACG AGAACCCCGC CTCGCGGCGC
CATGCACCCG ATGAAGAAGT GCGCCTGCTC GCGCCCTTCG ACCCCGTGGT GTGGGACCGC
CGCCGCTTCG AGCTGCTGTG GGGCTGGACG TACAAGTTCG AGGCCTACAT GCCGGCGCCG
AAGCGACAGT TCGGCTACTA CGCGCTGCCC CTGCTCTGGC ACGAGCGCGT GATCGGCTGG
GCCAACGTCA CGGCGCCCGA AGGCCGGCTG CAGCCCGCGT TCGGCTACGC CGCCGGCAAG
CCACCTCGCG ATGCGCTGTT CCGCGCGGCA CTCGACGACG AACTCCATCG TATGACGCAG
TTCCTCGCGA AGCGCTGA
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| Protein sequence | MATPTLDDLR RYAIARTLFK PTTLPGAIRR LGFVQADPIR APARAQDLTL RHRVKDYRAG
DLESRYTRLA IEEDCLVNYG FLPREHLALM HPREARQPWD ADTRRKAADV LAFVRERGPV
HPREVEQHFA HGSVKNYWGG SSNATTRLLD GLHYRGMLRV VRRDSGTRVY EAVTHVPADD
SPAGRAQRAA ALIDLVVRKY APLPAASLTY LVRLLGYGAP HLSAQTQAAL RLARDERLAS
CRIDGTTWYW PGDENPASRR HAPDEEVRLL APFDPVVWDR RRFELLWGWT YKFEAYMPAP
KRQFGYYALP LLWHERVIGW ANVTAPEGRL QPAFGYAAGK PPRDALFRAA LDDELHRMTQ
FLAKR
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