Gene Vapar_1848 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_1848 
Symbol 
ID7970865 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand- 
Start bp1980373 
End bp1981089 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content67% 
IMG OID644792449 
Productphosphoesterase, PA-phosphatase related 
Protein accessionYP_002943764 
Protein GI239814854 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.57185 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGCCCC TTCCGCGAAC GCACAGCCCC CAGACCTGGA CCGCAGACAT CGGCGCGCGC 
ATTCGCCGCC TCTTCTGGCT CAAGGCGATC GGCACCACGA TCTTCACCTG GCTCTTCTTC 
ATCGGCTACT TCCACATGCT GCGCAACCCG GCCTACCCGG TCGTGGTGAT GCCGCTCACG 
GCGCTGGACC ACCTGATTCC GTTCCAGCCC TACACGCTGG GCGCCTACCT CTCGCTGTGG 
TTCTACGTGG GCATCGCGCC CGGCCTGCAG CCCAACTTCC GCGAGCTGGT GGTGTACGGG 
CTGTGGATCG GCGCGCTGTG CCTGACGGGG CTGGGCCTCT TCTACTTCTG GCCGACGCAG 
ATACCGCCGC TGGCCATCGA CGTGTCGGGC TATCCCGGCT TTGCGATGCT GCAGGGCGTG 
GACGCAGCGG GCAACGCCTG CCCCTCGATG CACGTGGCGG TGGCCATCTT CACGGCCATC 
CGGCTGGACC ACGTGCTGCG CGAGGCGCGC ACGCCGGTCT TCCTGCGCCT TGCCAACTGG 
CTGTGGTTTG CCGCCATTGC GTATTCGACA TTGGCCGTCA AGCAGCACGT GGTGCTCGAC 
GCGCTGGCCG GCGCGCTGCT GGGAATGGCC TTCGCGCTTC CTTCGCTGCG CTGGCGGCCG 
GAGGGCATGC GCCGGAGCAA TACCCTGGTG GGAGCGGATA TCATTGGCCA TCACTGA
 
Protein sequence
MAPLPRTHSP QTWTADIGAR IRRLFWLKAI GTTIFTWLFF IGYFHMLRNP AYPVVVMPLT 
ALDHLIPFQP YTLGAYLSLW FYVGIAPGLQ PNFRELVVYG LWIGALCLTG LGLFYFWPTQ 
IPPLAIDVSG YPGFAMLQGV DAAGNACPSM HVAVAIFTAI RLDHVLREAR TPVFLRLANW 
LWFAAIAYST LAVKQHVVLD ALAGALLGMA FALPSLRWRP EGMRRSNTLV GADIIGHH