Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_1787 |
Symbol | |
ID | 7974529 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 1924560 |
End bp | 1925474 |
Gene Length | 915 bp |
Protein Length | 304 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644792386 |
Product | alpha/beta hydrolase fold protein |
Protein accession | YP_002943703 |
Protein GI | 239814793 |
COG category | [R] General function prediction only |
COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.994871 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACTGCTT CTCTCTTCGA CTTTCCGAGA TTCGACATCG AGCGCAACGG CGTGCGCGTG CATGGCCGCA TCGGCGGGCG CGGCGCGCCC CTGCTGCTCT TGCACGGGCA TCCGCAGACG CACCTGATCT GGCATCGCGT GGCGCCGGCG CTCGCCGAGC GGTTCACGGT GGTGGCGGTG GACCTGCGCG GCTATGGCGA CTCCGGCCGC CCCGCGGACG ATGCCGGCCA CGTGGCCTAC AGCAAGCGCG AAATGGCGCT CGATGCACTC GCCGCCATGC GCCATCACGG CTTCGAGCGC TTCGGCGTGC TGGCGCACGA CCGCGGCGCG CGCGTCGCGC ATCGGCTGGC CGCCGACCAT GTGGCGGCCG TCGACCGCAT GCTGCTGCTG GACATCGCAC CCACGCTCTC GATGTACGAG AACACCACCG AGGCCTTTGC GCGCGCCTAC TGGCACTGGT TCTTCCTGAT CCAGCCGCCG CCGCTGCCCG AGGCCTTGAT CGCCTCCGAC CCGGTGCGCT ACGTGCGCAG CGTGATGGGC GGGCGCCACG CGGGGCTCGC GCCTTTCGCG CCCGAGGTGC TGGCCGAATA CGAGCGCTGC GCCGCCATTC CGGGCACGGC CGAATCGATC TGCGGCGACT ACCGCGCGTC CGCCACCATC GATCTGGTGC ACGACCGCGC CGACATCGCC GCCGGCCGCA AGCTTGCGCA GCCGCTGCGC GTGCTCTGGG GCGAGCACGG CGCGGTGGGC CGCTGCTTCG ATGTGCTCTC GCTCTGGCGC GAATGCGCCG CCCAGGTTTC GGGCCGCGCC TTGCCGTGCG GCCACTACAT ACCGGAGGAG GCCCCGGGCG AACTGCTCGC CGAGGCGCTC CAGTTTTTCA CTTCCCCTCT CCAGCAAGAA GGAACCAGAC CATGA
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Protein sequence | MTASLFDFPR FDIERNGVRV HGRIGGRGAP LLLLHGHPQT HLIWHRVAPA LAERFTVVAV DLRGYGDSGR PADDAGHVAY SKREMALDAL AAMRHHGFER FGVLAHDRGA RVAHRLAADH VAAVDRMLLL DIAPTLSMYE NTTEAFARAY WHWFFLIQPP PLPEALIASD PVRYVRSVMG GRHAGLAPFA PEVLAEYERC AAIPGTAESI CGDYRASATI DLVHDRADIA AGRKLAQPLR VLWGEHGAVG RCFDVLSLWR ECAAQVSGRA LPCGHYIPEE APGELLAEAL QFFTSPLQQE GTRP
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