| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1636 |
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| Symbol | |
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| ID | 7974704 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 1769340 |
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| End bp | 1769852 |
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| Gene Length | 513 bp |
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| Protein Length | 170 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644792236 |
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| Product | hypothetical protein |
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| Protein accession | YP_002943553 |
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| Protein GI | 239814643 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCATGA CCTTTCGCAC CCTCACGATC GTCGCGGCGG CGCTCGCGCT CGCCGCCTGT
TCCGCATTCA AGCCTGCGGA CAAGGCCGGC GACGGCAAGC CGCCCGCTAC CGCCACCGAC
GAGGTGCCCG GCACAAGGGG CGACGTGCCG ACCGTGCGGC TGATCACCGC GCAGACGCCC
GCCGTGCGGG CCTACCGCAA GACCGGCGCG CGCCAGATCT ACAAGGCCTA TCCGCAGCGC
ATCTACAAGG GAAAGATCCC ACCGCTCGTC TATGCGGTGG TGGTGGTCGA GACCGACATC
GATGCCGAAG GCAACGTCAA GAACGTCACC TTCAGCCGCG TGCCGAGCCA TGCGCCCGAG
GTGCCGGGCA AGATTGCAGA ACTCATCAAG GCGGCGTCCC CGCTGCCCAG TCCGGGGCGC
CTGGGCGGCC ACACCTACGT GGACACCTGG CTCTGGGACA AGAGCGGCAA CTTCCAGCTC
GACTCGCTGA CGCTGGGCCA GCGCAGCCGG TAA
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| Protein sequence | MTMTFRTLTI VAAALALAAC SAFKPADKAG DGKPPATATD EVPGTRGDVP TVRLITAQTP
AVRAYRKTGA RQIYKAYPQR IYKGKIPPLV YAVVVVETDI DAEGNVKNVT FSRVPSHAPE
VPGKIAELIK AASPLPSPGR LGGHTYVDTW LWDKSGNFQL DSLTLGQRSR
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