| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1580 |
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| Symbol | |
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| ID | 7974809 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 1709947 |
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| End bp | 1710732 |
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| Gene Length | 786 bp |
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| Protein Length | 261 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644792180 |
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| Product | GntR domain protein |
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| Protein accession | YP_002943497 |
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| Protein GI | 239814587 |
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| COG category | [K] Transcription |
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| COG ID | [COG2186] Transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACCGA CGCAGGACGC CATGACCTTC GGGCACACCC GCGCCAAGCG GCAGAAGCTC
TCCGACGTCA TCGTCGAGGA CGTCAAGCGC TGGATCGTGG CCGAGCGCAA GCAGCCGGGC
GACCGGCTGC CGAATGAGAA GGAATTGATC GAGCTCTTCG GCTACTCGAA GAGCACGGTG
CGCGAGGCGT TGAAGGCGCT GGAGGTGCGC GGGCTGGTCT CCATCCGCAC CGGGCCGGGC
GGCGGCGCCT ACCTGCAGCA GGTCTCGGTC GACCATGCGT CGGAGCCGCT GCGCAACTTC
CTGCACTTCC ATCACCTGGA CGGGCACCAC ATCTACCAGC TGCGCAAGGT GCTGGAGCCC
GAGCTGGCCG TGAGCGTGGT CGGCAAGCTG ACGCCCGAGC AGTTCGAGCG GCTCGAAGCC
AACGTGCGCC TTTGCACGCT GGAGCCCACC AACGAGGACG AGCTGCGCAC GCAGCGCGAG
GCCGAGCTTG CGTTTCACAC CATGCTGGCC GAGGCCTGCC CCAATCCGGT GCTGTCCTTC
ATGTGCCGCT TCCTGAACGA CCTGCTGCGC GACCTCGTGG TCTACAAGAA GGCGCTGGAC
CATCACCACT TCGGCGAGGC CAATGTCGAC TATCACACGC AGCTGCTGGC GGCCTATCGC
CGGGAAGATG CGAACGAGGT GCGCCGGCTG ATGGCCGAGC ACATGGTCGA TGCCGAGGCG
CACATGCATG AGATGGAGGC GCACATCGGG GCGAAGCATC TGTTGCTGCC TAGCGGGCAG
CGTTGA
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| Protein sequence | MKPTQDAMTF GHTRAKRQKL SDVIVEDVKR WIVAERKQPG DRLPNEKELI ELFGYSKSTV
REALKALEVR GLVSIRTGPG GGAYLQQVSV DHASEPLRNF LHFHHLDGHH IYQLRKVLEP
ELAVSVVGKL TPEQFERLEA NVRLCTLEPT NEDELRTQRE AELAFHTMLA EACPNPVLSF
MCRFLNDLLR DLVVYKKALD HHHFGEANVD YHTQLLAAYR REDANEVRRL MAEHMVDAEA
HMHEMEAHIG AKHLLLPSGQ R
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