| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1557 |
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| Symbol | |
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| ID | 7974786 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 1682852 |
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| End bp | 1684303 |
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| Gene Length | 1452 bp |
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| Protein Length | 483 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644792157 |
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| Product | Microcystin LR degradation protein MlrC-like protein |
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| Protein accession | YP_002943474 |
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| Protein GI | 239814564 |
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| COG category | [S] Function unknown |
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| COG ID | [COG5476] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.138182 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTGTCT TCAGCGCCTC CCTGGCCACC GAAACCAACA CCTTCGGCCC GATGCCGACC
GGCCTCGCCT CCTTCAAGGA CCGCGGCTAC TTCCCGGCCG GCCAGCACCC GGATGCGATG
ACGCTGTTCT CGGGCCCGCT GTGGGCCGCA CGCATGCGCG GCGCCGATCG CGGCTGGCAG
CTGTTCGAGG GCATGGTGGC CGGCGCGCAG CCCAGCGGCA CCACCACGCG CCACGCCTAC
GAAACGCTGC GCGACGAGCT GCTGGCCGAC CTGCGTGCGG TGCTGCCGGT CGACATGGTG
CTGCTCGGCC TGCACGGCGC CATGGTGGCC GACGGCTACG ACGACTGCGA AGGCGACCTG
CTGGCGCGCG TGCGGCAGAT CGTCGGGCCG GGCGTGGTGA TCGGCGCCGA GCTCGATCCG
CACAACCACC TCACGCCGCA GATGGTCGCC AACGCCGACC TGATGATCTC GTTCAAGGAA
TATCCGCACA CCGACGTGCT CGAACGCGGC CTGGAGCTGG TGGACATCTG CGCCGCGATG
GCCGAAGGCA AGGTGAAGCC GGTGGCCGCG GTGGTCGACT GCGACATGAT CGTCACCGTC
CACACCTCGC GCGAGCCGGC GCGCGGCTTC GTCGAGCGCA TGCAGTCGCT CGAGGGCAAG
GACGGCGTGC TGTCGATCTC GCTCACGCAC GGCTTCTCGT GGGGCGACGT GCCCGAGATG
GGCACCAAGG TGCTGGTCTA CACGGATGGC GACCAGGCCA AGGCCGATGC GCTGGCCCGC
CAGCTGGCCG ACGAAGTCAT CGCCATGCGC GACGGCCTCG CCATCGACTA CCCGAGCATC
GACGCCTCGC TCGACCAGGC ACTGGCCTTC GACGGCAGCC CCGTGGTGCT GTCCGACGGC
GCCGACAACC CCGGCGGCGG CGCGGCCAGC GACTCCACCT TCATCCTGCG CCGCATGGTC
GAGCGCGGCA TCACGAACGC GGCCATCGGC CCGATGTGGG ACCCGATCGC GGTGCGCATC
GCCTTCGACG CGGGCGTGGG CGCCAAGCTC GCGATGCGCA TCGGCGGCAA GATCAGCCCG
CTCTCGGGCG ACCCGATCGA CCTGCAGTGC ACCGTGAAGG CGCTCAAGCA CGACCTGGTG
ATGACGGGCC TCGCGGGCAC GCCCACGCTG ATGGGCGACA GCGCGCTGGT CGAGGCCAAC
GGCATCGAGA TCGTGCTGAT CACGCTGCGC AACCAGGCCA TGGGCACCGA CCTGTTCACC
CAACTCGGAT GCGACCTCGC GGCCAAGAAG ATCATCGTCG TGAAGTCGTC GCAGCACTTC
TACGCTTCTT ACTCGAAGGT CGCGAAGCAC GTGATCTACG CCCGCGCACC GGGCGCCGTG
ACGCTCGACC TCAACACCCT GCCCTACCGA AAAGCCCGCC TCCCCAAGTG GCCCATCGGC
GTTGCCGCCT GA
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| Protein sequence | MRVFSASLAT ETNTFGPMPT GLASFKDRGY FPAGQHPDAM TLFSGPLWAA RMRGADRGWQ
LFEGMVAGAQ PSGTTTRHAY ETLRDELLAD LRAVLPVDMV LLGLHGAMVA DGYDDCEGDL
LARVRQIVGP GVVIGAELDP HNHLTPQMVA NADLMISFKE YPHTDVLERG LELVDICAAM
AEGKVKPVAA VVDCDMIVTV HTSREPARGF VERMQSLEGK DGVLSISLTH GFSWGDVPEM
GTKVLVYTDG DQAKADALAR QLADEVIAMR DGLAIDYPSI DASLDQALAF DGSPVVLSDG
ADNPGGGAAS DSTFILRRMV ERGITNAAIG PMWDPIAVRI AFDAGVGAKL AMRIGGKISP
LSGDPIDLQC TVKALKHDLV MTGLAGTPTL MGDSALVEAN GIEIVLITLR NQAMGTDLFT
QLGCDLAAKK IIVVKSSQHF YASYSKVAKH VIYARAPGAV TLDLNTLPYR KARLPKWPIG
VAA
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