Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_1479 |
Symbol | |
ID | 7973077 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 1599038 |
End bp | 1600126 |
Gene Length | 1089 bp |
Protein Length | 362 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644792077 |
Product | histidinol-phosphate aminotransferase |
Protein accession | YP_002943396 |
Protein GI | 239814486 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0079] Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase |
TIGRFAM ID | [TIGR01141] histidinol-phosphate aminotransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.247325 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCATCC CCGCACCGGC CTTCTGGAGC CCGCGCATCG CCGCGCTCGA ACCCTACGTG CCCGGCGAGC AGCCGCGCAT CGCCAACCTC GTCAAGCTCA ACACCAACGA GAACCCGTAT CCGCCGTCAC CGCTCGCCAT CGACGCCATC CAGCAGGCCG CGGCAAACGG CCTGGAGCGC TATCCGGACC CCACCTCGCT CGCGCTGCGC GAAGCCGTGG CGCGGCGGCA CGGCCTGCAG GCCGGCCAGG TCTTTGCGGG CAACGGCTCG GACGAGGTGC TGGCGCATGC CTTCTTCGCC TTCTTCCAGC AGGCCGAGCC GTTGCTGATG CCCGATGTGA GCTACAGCTT CTACCGGGTC TATGCGCAGC TCTACGGCAT CGGCTGCGAA CTGCTGCCGG TCGACGAAGG CCTGCGCATC GACGTCGATG CCATGGCGGC CCGCGCCCGC AGCGGCTGCG CGGGCCTGGT GATCGCCAAC CCGAATGCGC CCACGGGCAT CGGGCTGCCG CTCGCGCGCA TCGAGCAACT GCTCGCAGCC TGTCCCGAGC GCGTGGTGCT GGTCGATGAG GCGTATGTCG ATTTCGGCGG CGAGAGCGCG CTGCCGCTCA TCGGCAAGTA TCCGAACCTG CTGGTGGTGC AGACCTTGTC CAAGTCGCGT TCGCTGGCGG GCCTGCGGGT GGGCTTTGCC TGCGGGCAGG CGCATCTGGT CGACGCGCTG GTGCGCGTCA AGGACAGCTT CAATTCCTAT CCGCTCGACC GGCTTGCCAC CGCCGGCGCG GTGGCGGCGC TCGAAGACGA GGCCTGGTTC CAGACCACGC GCGACAAGGT CGTCGACACC CGCGAAGGGC TCAGCCTGCA GCTCGAAGAC CTGGGCTTTG AAGTGCTGCC CTCGCAGGCC AACTTCGTGT TCGCGCGCCA TCCGAAGCGC GATGCCGCCG AACTGGCGGC GCTGCTGCGC GAGCGCGCGG TGCTGGTGCG GCATTTCAGG CAGCCGCGCA TTGCGCAGTA CCTGCGCATC AGCATCGGCA CGCGCGAGCA GTGCGAGGCG CTGGTGCAGG CGCTCGAATC GATCCTGGGC GTTCAGTAG
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Protein sequence | MTIPAPAFWS PRIAALEPYV PGEQPRIANL VKLNTNENPY PPSPLAIDAI QQAAANGLER YPDPTSLALR EAVARRHGLQ AGQVFAGNGS DEVLAHAFFA FFQQAEPLLM PDVSYSFYRV YAQLYGIGCE LLPVDEGLRI DVDAMAARAR SGCAGLVIAN PNAPTGIGLP LARIEQLLAA CPERVVLVDE AYVDFGGESA LPLIGKYPNL LVVQTLSKSR SLAGLRVGFA CGQAHLVDAL VRVKDSFNSY PLDRLATAGA VAALEDEAWF QTTRDKVVDT REGLSLQLED LGFEVLPSQA NFVFARHPKR DAAELAALLR ERAVLVRHFR QPRIAQYLRI SIGTREQCEA LVQALESILG VQ
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