| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1452 |
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| Symbol | |
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| ID | 7971280 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 1577005 |
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| End bp | 1578213 |
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| Gene Length | 1209 bp |
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| Protein Length | 402 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644792050 |
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| Product | acetylornithine aminotransferase |
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| Protein accession | YP_002943369 |
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| Protein GI | 239814459 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4992] Ornithine/acetylornithine aminotransferase |
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| TIGRFAM ID | [TIGR00707] acetylornithine and succinylornithine aminotransferases |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGCTA CCGCCCAGCC CACCTCGCCC CACGTCATGA ACACCTACGG TCGCCTGCCG
ATCGCGCTGT CGCACGGCCA GGGCTGCCGA GTCTGGGACA CCGCGGGCAA GGCCTACCTC
GACGGCCTCG GCGGCATTGC CGTGAACACG CTGGGCCACA ACCACCCCGA GCTGGTGCCC
GCGCTGCAGG ACCAGATCAG CAAGCTGATC CACAGCTCCA ACTACTACCA CGTGCCCGGC
CAGGAACAGC TGGCCGCCAA GCTGACCGAG CTCTCGGGCC TGACCAACGC CTTCTTCTGC
TGCACCGGCC TGGAAGCCAA CGAGGCCGCC CTGAAGCTCG CGCGCAAGTT CGGCCACGAC
AAGGGCATCG AGCGGCCCGA GATCGTGGTG TACGAAGCCG CTTTCCACGG CCGCAGCATC
GCCACCCTGT CGGCCACCGG CAACCCGAAG GTGCAGGCCG GCTTCGGCCC GCTGGTCGAG
GGCTTCATCC GCGTGCCGCT GAACGACATC GAGGCCCTGA AGAAAGCCAC CGAAGGCAAC
CCCAACGTGG TCGCCGTGTT CTTCGAGACC ATCCAGGGCG AAGGCGGCAT CAACCCGATG
CGCTGGGAGT ACCTCAAGCA GGTGCGTGCC CTGTGCGACC AGCGCGACTG GCTCATGATG
ATCGACGAAG TGCAATGCGG CATGGGCCGC ACCGGCAAGT GGTTTGCGCA CCAGTGGGCC
GGCATCAAGC CCGACGTGAT GCCGCTGGCC AAGGGCCTGG GCTCGGGCGT GCCGATCGGC
GCCGTGGTGG CCGGTCCCAA GGCCGCCCAC ATCTTCGGCC CCGGCAACCA TGGCACCACC
TTCGGCGGCA ATCCGCTTGC GATGCGCGCC GGCATCGAGA CCATCCGCAT CATGGAAGAG
CACAAGCTGC TCGAGAACGC CGCCGCCGTG GGCGAGCACC TGAAGGCCGC GCTGGAACGC
GAGATCGGCG GCCTGACCGG CGTGAAGGAA ATCCGCGGCC AGGGCCTGAT GCTGGGCATC
GAGCTCGACC GGCCCTGCGG CGTCATCCTG AACCGCGCCT GCGACGCCGG CCTGCTGCTG
AGCGTGACGG CCGACAAGGT GATCCGCCTG GTGCCGCCGC TCATCCTGAG CATTGCCGAG
GCCGACGAGA TCGTCGCGAT CCTCGCGCCC CTCGTCAAAA CATTCCTGTC GGAGCCCGCA
GCGCAATGA
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| Protein sequence | MSATAQPTSP HVMNTYGRLP IALSHGQGCR VWDTAGKAYL DGLGGIAVNT LGHNHPELVP
ALQDQISKLI HSSNYYHVPG QEQLAAKLTE LSGLTNAFFC CTGLEANEAA LKLARKFGHD
KGIERPEIVV YEAAFHGRSI ATLSATGNPK VQAGFGPLVE GFIRVPLNDI EALKKATEGN
PNVVAVFFET IQGEGGINPM RWEYLKQVRA LCDQRDWLMM IDEVQCGMGR TGKWFAHQWA
GIKPDVMPLA KGLGSGVPIG AVVAGPKAAH IFGPGNHGTT FGGNPLAMRA GIETIRIMEE
HKLLENAAAV GEHLKAALER EIGGLTGVKE IRGQGLMLGI ELDRPCGVIL NRACDAGLLL
SVTADKVIRL VPPLILSIAE ADEIVAILAP LVKTFLSEPA AQ
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