| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1404 |
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| Symbol | |
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| ID | 7971232 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1526743 |
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| End bp | 1527516 |
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| Gene Length | 774 bp |
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| Protein Length | 257 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644792002 |
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| Product | DNA repair protein RecO |
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| Protein accession | YP_002943321 |
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| Protein GI | 239814411 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1381] Recombinational DNA repair protein (RecF pathway) |
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| TIGRFAM ID | [TIGR00613] DNA repair protein RecO |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCCGCTG CCCACCGCGT TTCGCACGAA CCCGCGTACG TGCTCCATCG CTACGACTGG
AGCGAGTCGA GCCTGATCCT CGAGGTCTTC ACCCGCCACC ACGGGCGCAT CGCGCTGGTG
GCCAAGGGGG CGAAGCGGCC GAGTTCCAAT TTCAGGCCGG TGCTGCTGCC GCTGCAGCCG
CTGCAGCTCA ACTACGGCGG CGACGCCGAG ATCCGCACGC TCAAGGGCGC CGAGTGGATG
GGCGGCCACG TCATGCCGAC CGGCGAGGCG CTGCTCTCGG GCTACTACGT CAACGAACTG
CTGCTGCGCC TGCTGGCGCG GGACGATGCC CACGAGGCGC TGTTCGATGC CTATGCGGGC
GTGGTGCAGG TGCTGGCCGG CGACCATGCC GGCGCGCAGG CCGCCACCCA GGCCGCGGCG
CTGCGCGCCT TCGAGCTGCT GCTGCTGCGC GAAGTGGGCC TGCTGCCGTC GCTCGACGTG
CAGACCCTCA CGCTCGAGCC GCTCGTGGCC GACGCCCGCT ACACCCTGGT GCCCGAAGCC
GGCCTGCGGC TGGCGGCCGA AGGCGAGGCG GCGCTGTCCG GTGCCGACTG GCAGTCGCTG
CAGGGCGTGC TCGACGACCG CGCGCCCTTC ACGGCCACGC TGCGCGAGAT TGCGACCATG
AACGCCGGCA GCAACAGCGC CCTCAGGAAC CAGCTGCGCG CGCTGCTCAA CTACCATTGC
GGTGTGTCCA CGCTGCGCAC GCGGCAGATG ATGAGAGATT TGCAAGCCCT ATGA
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| Protein sequence | MAAAHRVSHE PAYVLHRYDW SESSLILEVF TRHHGRIALV AKGAKRPSSN FRPVLLPLQP
LQLNYGGDAE IRTLKGAEWM GGHVMPTGEA LLSGYYVNEL LLRLLARDDA HEALFDAYAG
VVQVLAGDHA GAQAATQAAA LRAFELLLLR EVGLLPSLDV QTLTLEPLVA DARYTLVPEA
GLRLAAEGEA ALSGADWQSL QGVLDDRAPF TATLREIATM NAGSNSALRN QLRALLNYHC
GVSTLRTRQM MRDLQAL
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