Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_1357 |
Symbol | |
ID | 7973038 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | - |
Start bp | 1476648 |
End bp | 1477421 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644791955 |
Product | lipolytic protein G-D-S-L family |
Protein accession | YP_002943274 |
Protein GI | 239814364 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2755] Lysophospholipase L1 and related esterases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0467272 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAACCG CGCTGGCCGC CGCGCTGCTG CTGACAACCG CACTCGCCTC GCAGGCCCAG AACCACAACG CCGTGCTGCC CTACGAGTCG CTGGACGGCA CGGCGGCCGA TGCGGCCGCC TCCTCCTCCG AATACCTGGC GGCCAAGGCG CGCTGGCACA ACGAGCTGGC CGCCTTCTTC CGGGCCGACC AGCAGCAGTT CCCGGCGCCC GGCGGCGTGG TGTTCGTGGG CAGTTCCACC GTGCGCATGT GGAAAAGCCT CGCGCAGGAT TTCCGCCAGG TGCCCGGCAT CGTCAACCGC GGCTTCGGCG GCTCGACCCT GGCCGACTGC AGCCTGTTCG CGCGCGACCT GGTGGTGCGC TACCGGCCGC GGCAGGTGCT GGTGTACGCC GGCGACAACG ACCTGGCCGA GGGCCGCACA CCGCTGCAGG TGCTCGAGAG CTTTGCGCGC TTTGCCAATG CGGTGCGCGC GGAGCTGCCG AACACGCGCA TCAGCTTCAT CTCGATCAAG CCGAGCCCTT CGCGCGAGCA CCTGATGCCG CAGATCCGCG AAACCAACAA CGTGATCTCG GCCTACCTCA ACCGGCTGCC CGCCAGCGAA TACATCGACG TCTTCACGCC CATGCTCGGC GCCGACGGCC GGCCGCGGCC CGAGCTGTTC AGGAGCGACC GGCTGCACAT GACCGACGAG GGCTACCGGC TCTGGCAATC GGTCATCGCC AGCCACTTGC CAGGCGCCGC GCCAGTCGCG GCGCCGGCGG CCGCCCTGCC CTGA
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Protein sequence | MKTALAAALL LTTALASQAQ NHNAVLPYES LDGTAADAAA SSSEYLAAKA RWHNELAAFF RADQQQFPAP GGVVFVGSST VRMWKSLAQD FRQVPGIVNR GFGGSTLADC SLFARDLVVR YRPRQVLVYA GDNDLAEGRT PLQVLESFAR FANAVRAELP NTRISFISIK PSPSREHLMP QIRETNNVIS AYLNRLPASE YIDVFTPMLG ADGRPRPELF RSDRLHMTDE GYRLWQSVIA SHLPGAAPVA APAAALP
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