| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1254 |
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| Symbol | |
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| ID | 7973178 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1367325 |
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| End bp | 1368938 |
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| Gene Length | 1614 bp |
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| Protein Length | 537 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644791851 |
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| Product | Gamma-glutamyltransferase |
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| Protein accession | YP_002943171 |
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| Protein GI | 239814261 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0405] Gamma-glutamyltransferase |
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| TIGRFAM ID | [TIGR00066] gamma-glutamyltranspeptidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.760239 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATTTCG ACTTCAGCAA TCCCTACCTC TCCACCCGCA TTCCGATCTT CGCGCGCAAC
GTGGTGTCGA CCTCGCACCC GCTCGCCTCG CAGGCGGGGC TGCGCATGCT GCAGCAAGGC
GGCAATGCCG TCGATGCGGC CATTGCCACC GCGGCCGTGA TGACGCTGGT CGAGCCCGTG
AGCAACGGCC TGGGCAGCGA CGCCTTCTGC ATCCTGTGGG ACGGCAAGGA ACTGCACGGC
CTCAACGCCT CGGGCCCCGC GCCCAAGGCC TGGACGCCCG ACTACTTCAA GGCCAAGTAC
GGCGCCGACG CCGCCACGCC GCCGATGCGC GGCATCGATT CGGTCACCGT GCCGGGCGCG
GTGCGCGGCT GGGTGGCGCT CTCCGACCGC TTCGGCAAGC TGCCTTTCGC CGACCTGCTG
GCACCGGCCA TCGACATCGC CGAGCGCGGC TACCTGGTGC CGCCGGTGGT GCAGCAGAAG
TGGGCCGCTG CCACGCCGGT GCTGGCATCG GTGGCGGGCT TCGCGCAGAC CTTCATGCCC
TGGGGCCGCG CACCCGAAGT GGGCGAGCTG TTCCGCTTCA CGGCCGCCGC GCGCGCGCTC
AAGGCCATTG CCCGCACCAA GGGCGAGGCC TACTACAGCG GCGAGATTGC CGAGGCGCTT
GCCAGGTTCT CGAAGGAGCA GGGCGGCTCG CTCACGGTGG CCGACCTCTC GGCCTACCAG
CCCGAATGGG TCAAGCCGAT CTCGCGCGAC TACCGCGGCC ACACGCTGCA CGAGATTCCG
CCCAACGGGC AGGGCATTGC GGCGCTGATC GCGCTCGGCA TCCTCGAGAA GTTCGACATC
GCCTCGCTGC CGGTCGACTC GGTCGCTTCG CAGCACCTGC AGATCGAGGC GATGAAGCTC
GCCTTCGCCG ACGTCTACCG TTATGTGTCG GAGCCATCGT CGATGACGGT GACACCCGCG
CAAATGCTCG ATGACTCCTA CCTCGCATCG CGTGCGAGAC TCATCGACGT GAAAAAGGCA
CAGGACTTCA AGGCCGGCAA TCCCGTCAAG GGCGGCACCA TCTACCTCAC GGCGGCCGAC
GAGAGCGGCA TGATGGTGAG CTTCATCCAG AGCAACTACA TGGGCTTCGG CTCGGGCTGC
GTGGAGCCCG AGTTCGGCAT CAGCCTGCAG AACCGCGGCC ATGGCTTCAG CCTCAAGGCC
GAGAGCCCGA ACGTCGTGGC GCCGGGCAAG CGGCCGTTCC ACACCATCAT CCCGGCCTTC
CTCACCAAGG ACGGCCAGCC GGTGATGAGC TTCGGCGTGA TGGGCGGCAA CATGCAGCCG
CAAGGCCACA TGCAGACGCT GGTGCGCATG CTCGACTACA AGCAGAACCC GCAGGCCGCC
TGCGATGCGC CGCGCTGGCG CTTCAACGCG GGGCTCGAGA TCAACGTCGA GGCCGCAATG
GACTCGGCCA CGGTGCAGGG CCTGCGCGAG CTCGGCCACC ACCTGGACGT GATCGACGAC
TCCTACCAGG ACTTCGGCGC CGGCCAGTTC ATCTGGCGCG CGGGCGATCC GTCGGTCGAA
GGCTACGTGG CCGCCAGCGA TCCGCGCCGC GATGGCCTTG CGGCAGGCTT TTGA
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| Protein sequence | MNFDFSNPYL STRIPIFARN VVSTSHPLAS QAGLRMLQQG GNAVDAAIAT AAVMTLVEPV
SNGLGSDAFC ILWDGKELHG LNASGPAPKA WTPDYFKAKY GADAATPPMR GIDSVTVPGA
VRGWVALSDR FGKLPFADLL APAIDIAERG YLVPPVVQQK WAAATPVLAS VAGFAQTFMP
WGRAPEVGEL FRFTAAARAL KAIARTKGEA YYSGEIAEAL ARFSKEQGGS LTVADLSAYQ
PEWVKPISRD YRGHTLHEIP PNGQGIAALI ALGILEKFDI ASLPVDSVAS QHLQIEAMKL
AFADVYRYVS EPSSMTVTPA QMLDDSYLAS RARLIDVKKA QDFKAGNPVK GGTIYLTAAD
ESGMMVSFIQ SNYMGFGSGC VEPEFGISLQ NRGHGFSLKA ESPNVVAPGK RPFHTIIPAF
LTKDGQPVMS FGVMGGNMQP QGHMQTLVRM LDYKQNPQAA CDAPRWRFNA GLEINVEAAM
DSATVQGLRE LGHHLDVIDD SYQDFGAGQF IWRAGDPSVE GYVAASDPRR DGLAAGF
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