| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1245 |
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| Symbol | |
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| ID | 7973169 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1358464 |
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| End bp | 1359324 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644791842 |
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| Product | TatD-related deoxyribonuclease |
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| Protein accession | YP_002943162 |
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| Protein GI | 239814252 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0084] Mg-dependent DNase |
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| TIGRFAM ID | [TIGR00010] hydrolase, TatD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTGTTT TTGTCGATAC CCACTGCCAC CTCGATGCGC CCGAATTCGG TGCGGAAATG
CCGCTCGTGC GTGCACGGGC CGCCGAAAGG GGCGTGGTGC TGTGCGTCAT TCCCGCAGTG
GCGGTCTTCA ACTTTGCGAC CGTGCGCGAA CTGGCGAAGG TGCAGGGCGA CGCCTATGCG
CTGGGCATCC ACCCGCTGTG CACCGGCAAT GCAGAGGAGG GCGACCTGGA GGCGCTCGAT
GCCGAGCTTG CCGCGCACTG CGGCGATCCG CGGCTGGTCG CGGTCGGCGA GATCGGCCTC
GACTACTTCG TGGAAGGGCT GGACAGCGAC AAGCAGCAGC ACTTCTTTCA CACTCAGTTG
CAACTCGCGC GCAAATACGA TCTGCCGGTG CTCATCCACG TGCGCCGCTC GGTCGACAAG
GTGCTCAAGC ACCTGCGGCA GACCGCGGCC GGCCGGCCGT GGCAGGGCAT TGCCCATGCG
TTCAACGGCA GCGAGCAGCA GGCCGCGGCC TGCATCGGGA TCGGCCTGAA GCTGGGCTTC
GGCGGCGCCG TGACCTTCGA CCGCGCATTG CAGCTGCGGC GGCTGGCGGC CACGCTGCCG
CTCGAATCGA TGGTGATGGA AACCGATGCA CCCGACATCC AGCCGCATTG GCTCTACCGC
ACCCAGGCGC AGCGCGCGGC CGGCGAAGCG CAGGGCCGCA ACGAGCCAGG CGAGCTGCCG
CGCATCGCCG AAGTGGTGGC GCGGCTGCGC GGCATCGGCA TCAATGAACT GGCCGAAGCC
ACCACCCGCA ATGCGCTCGC GGCGCTGCCG CGGCTCGAAA GCCTCCTGTC CTTGTCGGAA
GGCCGGCCGC ACACCGCGTA G
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| Protein sequence | MAVFVDTHCH LDAPEFGAEM PLVRARAAER GVVLCVIPAV AVFNFATVRE LAKVQGDAYA
LGIHPLCTGN AEEGDLEALD AELAAHCGDP RLVAVGEIGL DYFVEGLDSD KQQHFFHTQL
QLARKYDLPV LIHVRRSVDK VLKHLRQTAA GRPWQGIAHA FNGSEQQAAA CIGIGLKLGF
GGAVTFDRAL QLRRLAATLP LESMVMETDA PDIQPHWLYR TQAQRAAGEA QGRNEPGELP
RIAEVVARLR GIGINELAEA TTRNALAALP RLESLLSLSE GRPHTA
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