| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1167 |
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| Symbol | |
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| ID | 7973336 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1281376 |
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| End bp | 1282467 |
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| Gene Length | 1092 bp |
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| Protein Length | 363 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644791763 |
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| Product | histidinol-phosphate aminotransferase |
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| Protein accession | YP_002943084 |
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| Protein GI | 239814174 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0079] Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase |
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| TIGRFAM ID | [TIGR01141] histidinol-phosphate aminotransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACATCTT CTTCGCCCGC CGCCCGCCCG ATCGACCGCA TCCGCTCCGA CGTGCAGTCC
ATGCATGCCT ATGCGGTGCA GGACGCACGC GGCTTCGTCA AGCTCGACGC CATGGAAAAC
CCCTTCGGCC TGCCGCCCGC GCTGCAGGCC GAGCTTGGCG CGCGGCTCGG TGCGTTGGCG
CTCAACCGCT ATCCGGGCGA GCGCGGCGCC GACCTGCAGC GCGCGCTGGC CGCGCATGCG
CAGATGCCCG AGGGCTTTGC GCTGATGCTG GGCAACGGCT CCGACGAACT GATCTCGCTG
CTCGCCATTG CCTGCGACGT GCCCGGCGCC GCGGTGCTCG CGCCCGTGCC CGGCTTCGTG
ATGTACGCAA TGAGCGCGAA ACTGCAGGGC CTGCGCTTCG TCGGCGTGCC GCTCACGGCC
GATTTCGAAC TCGACGAGGC CGCCATGCTT TCGGCCATCG CACGCGAGAA GCCGGCCATC
GTGTACCTGG CCTATCCGAA CAACCCCACC GCCAACCTCT GGGACGATGT CGCCATCGAG
AAGATCGTGC AGGCCCAGGG CGAGCAGGGC GGGCTGGTGG TGATCGACGA GGCCTACCAG
CCCTTTGCCG CCAGGAGCTA CATCGACCGC ATTGCGCGGC ATGGCCATGT GCTGCTGATG
CGCACGCTCA GCAAGTTCGG CCTGGCCGGC ATCCGCCTGG GCTACCTCAT GGGCCCGGCC
GCGCTGGTCG CGCAGATCGA CAAGGTGCGC CCGCCCTACA ACATCAGCGT GCTCAATTGC
GAGTGCGCAC TGTTCGCGCT CGAGCATGCC GAGGTGTTCG AGGCCCAGGC GCGGCAGATC
CGCGACGAGC GCCACCGTCT CATGATGGGG CTGGGCCGCC TGGCGGGCGT GAAGGCCTGG
CCGAGCGATG CCAACATGAT CCTCGTGCGG GTGCCCGATG CCGCCAAGGC CTTCGAAGGC
ATGAAGGCGC GCGGGATTCT TGTGAAGAAC GTTTCTAAAA TGCACGAACT GCTCGCAAAC
TGCCTGCGCC TCACCGTCGG AACGGCCGAC GAGAATGCGC GGATGCTCGC GGCACTCGAA
GCCTCACTAT GA
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| Protein sequence | MTSSSPAARP IDRIRSDVQS MHAYAVQDAR GFVKLDAMEN PFGLPPALQA ELGARLGALA
LNRYPGERGA DLQRALAAHA QMPEGFALML GNGSDELISL LAIACDVPGA AVLAPVPGFV
MYAMSAKLQG LRFVGVPLTA DFELDEAAML SAIAREKPAI VYLAYPNNPT ANLWDDVAIE
KIVQAQGEQG GLVVIDEAYQ PFAARSYIDR IARHGHVLLM RTLSKFGLAG IRLGYLMGPA
ALVAQIDKVR PPYNISVLNC ECALFALEHA EVFEAQARQI RDERHRLMMG LGRLAGVKAW
PSDANMILVR VPDAAKAFEG MKARGILVKN VSKMHELLAN CLRLTVGTAD ENARMLAALE
ASL
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