| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1112 |
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| Symbol | |
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| ID | 7969634 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1219045 |
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| End bp | 1220439 |
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| Gene Length | 1395 bp |
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| Protein Length | 464 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644791708 |
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| Product | Mannitol dehydrogenase domain protein |
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| Protein accession | YP_002943029 |
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| Protein GI | 239814119 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0246] Mannitol-1-phosphate/altronate dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGTGCTTC ACCTCGGACT CGGCTCGTTC CATCGGGCCC ACCAGGCCGT CTACCTGCAG
CGGCTGATCG ATGCGGGCGA CACCCGCTGG TCGCTCTCGG GCGCCAACAT CAGGCCCGAC
ATGGCCGAGG TCGTCGCGGC GCTGCAGGCG CAGGGCGGGC GCTACACGCT CGAAACCGTG
TCGCCGGCCG GCGAGTACCG CTACGAGCAG ATCGAGGCCA TCCGCGAAGT GCTGCCGTGG
GAGCCCTCGC TGGCCGCGGT GATCGCACGC GGCGCCGCGC CGTCCACGCG CATCGTTTCG
TTCACCGTGA CCGAGGCCGG CTACTACCTC GACACCAAGG GCCGGCTGGA CCTGTCGTTC
GCCGATCTGG CAGCCGACAT CGAGCGCGCG CGGCGCGGCG ATGCTCCCGG CGAGGGCGTG
ACCATCTACG GCGCCGTCTG CGCGATCCTG CGTGCGCGCA AGGCTGCGCA GGCCGGCGCG
GTCACGCTGC TCAACTGCGA CAACCTGCGC CACAACGGCG ATCGCTTCCG CGCCGGGCTG
CTCGAATTCA TCGAGCGCGC GGGCGACGCC GATCTGCTGG CATGGGTGCA GGCGAACACC
GCCTGCCCCA ATGCGATGGT CGACCGCATC ACGCCGCGCC CGCCGCCCGA GCTGCGCGCA
CGCGTGCAGA CCGCAACGGG CCGCGACGAT GCGGCCGCGA TCACCGGCGA GAGCTTCATC
CAGTGGGTGA TCGAAGACAA CTTCGCGTCC GGCCGGCCCG ACTGGGGCCG CGTGGGCGTG
GAGCTGGTCG AATCGGTGCA GCCCTATGAA GAGGCCAAGA TCCGCATCCT CAACGCCACG
CACAGCTGCA TCGCCTGGGC CGGCACGCTG GCGGGGCTGA ACTTCATCCA CGAAGGCACG
CACGACGCGG CCATCCGCAA GATGGCCTTC GACTACGTCA CCGACGACGT GATCCCATGC
CTCAGCCCGA GCCCGATCGA CCTCGCGGCC TACCGCGACG TGGTGCTCGA CCGCTTCGGC
AACCCCGCGA TCCGCGACAC CAACCAGCGC GTGGCGGCCG ATGGTTTTTC CAAGATCCCG
GGCTTCATCG CGCCCACGGT GCGCGAGCGG CTGGCCGCGG GGCAGCCGAT CGACAGCGTC
GCGATGCTGC CCGCGCTGTT CCTGGCCTTC CTGCAGCGCT GGCATCGCGG GGCGCTGCCC
TATGCCTACC AGGACCAGGG CATGGACGAG GCCGTGGCGC ACGCGATCTG CGATGCCGCC
GATCCGGTGC TCGCGCTGTG CGCCGACCCG GCACTGTGGG GCGCCGCCGC GGGCGATGCG
CGGCTGGTAG GCGCGGTGCG CGCAGCGAGC GCGCGCGTGG CAAATTTCCT GAAGAACCCT
GGAGCAACGA CATGA
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| Protein sequence | MVLHLGLGSF HRAHQAVYLQ RLIDAGDTRW SLSGANIRPD MAEVVAALQA QGGRYTLETV
SPAGEYRYEQ IEAIREVLPW EPSLAAVIAR GAAPSTRIVS FTVTEAGYYL DTKGRLDLSF
ADLAADIERA RRGDAPGEGV TIYGAVCAIL RARKAAQAGA VTLLNCDNLR HNGDRFRAGL
LEFIERAGDA DLLAWVQANT ACPNAMVDRI TPRPPPELRA RVQTATGRDD AAAITGESFI
QWVIEDNFAS GRPDWGRVGV ELVESVQPYE EAKIRILNAT HSCIAWAGTL AGLNFIHEGT
HDAAIRKMAF DYVTDDVIPC LSPSPIDLAA YRDVVLDRFG NPAIRDTNQR VAADGFSKIP
GFIAPTVRER LAAGQPIDSV AMLPALFLAF LQRWHRGALP YAYQDQGMDE AVAHAICDAA
DPVLALCADP ALWGAAAGDA RLVGAVRAAS ARVANFLKNP GATT
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