Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_1111 |
Symbol | |
ID | 7969633 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 1217928 |
End bp | 1218965 |
Gene Length | 1038 bp |
Protein Length | 345 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644791707 |
Product | ABC transporter related |
Protein accession | YP_002943028 |
Protein GI | 239814118 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3839] ABC-type sugar transport systems, ATPase components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCTACC TGCAACTCAA AGACATCAAG AAGAGCTTCG GCGACGTCGA CATCATCAAG GGCGTCGACC TCGAGATCCA GAAGGGCGAG TTCATCGTCT TCGTCGGTCC TTCGGGCTGC GGCAAGTCGA CGCTGCTGCG CCTCATTGCG GGGCTCGAGC CGATCACCAG CGGCAAGTTG CTGCTCGACG GCAAGGACAT CACCTGGGCG CCTTCGGGCA AGCGCGACCT GGCGATGGTG TTCCAGAGCT ATGCGCTCTA TCCGCACATG AGCGTGTACG ACAACATGTC CTTCGCGCTC AAGCTCGCGG GCGTGCCCAA GGACGAGATC AAGACCAAGG TGGAGTACGC GGCGAAGACG CTCAACCTCA CGCAGTACCT CGACCGCACG CCTAAGGACC TGTCGGGCGG CCAGCGCCAG CGCGTGGCCA TCGGCCGCGC GATCGTTCGC GCGCCCAAGG TGTTCCTGTT CGACGAGCCG CTGTCCAACC TGGATGCGGC GCTGCGCGGC AACACGCGCG TCGAGATCCA CAAGCTGCAC CGCTCGCTCG GCGCCACCAC CATCTACGTG ACGCACGACC AGGTCGAGGC CATGACGCTG GCCGACCGCG TGGTGGTGCT CAGGGACGGG CTCATCGAGC AGGTCGGCAC GCCGCTCGAG CTGTACGACC ACCCGGCCAA CCAGTTCGTC GCGCAGTTCA TCGGCATGCC GTCGATGAAC ATGGTGGCGG CAAGCGCCAT TCCGAGTTTT TCCGCCGCCA CCGGCGGTCG CCTGCCGAGC GACGGCTTCC TGGGCGTGCG GCCCGAAGGC CTGCGCGTGC ATCCGAAGCA GGCTGCGCCC GCGGGCGTGC CGGGGCGCGT GGAGCTGATC GAGGCGCTGG GCGCCGACAC GCTGATCCAC GTCGACGTGG GCGGCGTGCC GCTGATCGCG CGCCAGAACG AGCGCACGCC GCTGCATGCA GGCGACGACG TGGCGGTCGA GCTCGATCCG TCGGTGCTTC ATTTGTTCAA CCGCGAAGGC CGCTCGGTCT CCGCCTGA
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Protein sequence | MAYLQLKDIK KSFGDVDIIK GVDLEIQKGE FIVFVGPSGC GKSTLLRLIA GLEPITSGKL LLDGKDITWA PSGKRDLAMV FQSYALYPHM SVYDNMSFAL KLAGVPKDEI KTKVEYAAKT LNLTQYLDRT PKDLSGGQRQ RVAIGRAIVR APKVFLFDEP LSNLDAALRG NTRVEIHKLH RSLGATTIYV THDQVEAMTL ADRVVVLRDG LIEQVGTPLE LYDHPANQFV AQFIGMPSMN MVAASAIPSF SAATGGRLPS DGFLGVRPEG LRVHPKQAAP AGVPGRVELI EALGADTLIH VDVGGVPLIA RQNERTPLHA GDDVAVELDP SVLHLFNREG RSVSA
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