| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1067 |
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| Symbol | |
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| ID | 7969589 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1169688 |
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| End bp | 1170941 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644791663 |
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| Product | major facilitator superfamily MFS_1 |
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| Protein accession | YP_002942984 |
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| Protein GI | 239814074 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG2807] Cyanate permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.359193 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGACAT TCGAGACAAG CGCCCACGCG GCGGATTCGC GCTACGCCAT GCTGCGGCTC
GGCCTCACGC TGCTGGTCAT GACGGTCGGC AGCAGCGGCA TGTACGTGGT CTCGGTGATG
CTGCCGGCCG TGCAGGCCGA GTTCGGCATC GCGCGCGCCG ATGCCTCGCT GCCCTACACG
CTGCTGATGC TCGGCTTCGG CGTGGGCGGC GTGCTGATGG GGCGGCTGGC CGATCGCTTC
GGCGTGATGT GGCCCCTGCT GATCGGCGCG CTGAGCCTCG GCGTGGGTTA TGTCGCCTGC
GGCATGGCCG ATGGCATCGT GTCTTTCACC CTCGCGCAGG CGGTGCTGGT CGGCCTGCTC
GGCAGCGCCG CGGCCTTTGC GCCGCTGGTG GCGGACACCT CGCTCTGGTT CGTCAAGCGG
CGCGGTATCG CGGTGGCGGT GTGCGCGAGC GGCAACTACG TGGCAGGCGC CATCTGGCCG
CCGATTGCGC AGCACTTCAT CGAGACGGTG GGCTGGCGCC AGACCTACAT CGGCATGGGC
CTCTTTTGCG GCCTGGCAAT GGCGGCGCTC GCGCTCTTCT TTCGCGCGCG GCCGCCGGCA
GTGGCCGCGG CGCCGGCCAG CCATGCGGGC CATGCCGGGC GGCGGCGCGA CATGACGCGG
CCCTTCGGCT TCAGCATGGG CACCGCACAG GGCCTGCTGT GCGTGGCGGG CGTGGCCTGC
TGCGTGGCCA TGGCGATGCC GCAGGTGCAC ATCGTGGCCT ACTGCGGCGA CCTCGGCTAC
GGCCCGGCGC AGGGCGCGCA GATGCTGTCG CTGATGCTGG GCTTCGGCGT GGTGAGCCGG
CTGGTGTCGG GCGCGATCTG CGACCGCATC GGCGGGCTGC GCACGCTGCT GCTCGGCGGC
GCGCTGCAGG GCGTGGCGCT GCTGCTGTTC CTGCCGTTCG ACGGGCTGGT GTCGCTCTAT
GTGATCTCGG CGCTGTTCGG GCTGTTCCAG GGCGGCATCG TGCCGTCCTA CGCGATCATC
GTGCGCGAGC ACTTCCCGCC CGAGGAAGCC GGCGCGCGCG TGGGCACGGT GCTGATGTTC
ACGCTGTTCG GCATGGCGCT GGGCGGCTGG ATGTCGGGCA AGGTGTTCGA CCTGACTGGC
AGCTACCACG CGGCGTTCCT CAACGGCATC GGCTGGAACC TGCTGAACGT CAGCATCGCG
GCGATGCTGC TGTTCAGGGT CCGGCATCTG CGGCTTCGCA CCGCCGCGGC GTAG
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| Protein sequence | MKTFETSAHA ADSRYAMLRL GLTLLVMTVG SSGMYVVSVM LPAVQAEFGI ARADASLPYT
LLMLGFGVGG VLMGRLADRF GVMWPLLIGA LSLGVGYVAC GMADGIVSFT LAQAVLVGLL
GSAAAFAPLV ADTSLWFVKR RGIAVAVCAS GNYVAGAIWP PIAQHFIETV GWRQTYIGMG
LFCGLAMAAL ALFFRARPPA VAAAPASHAG HAGRRRDMTR PFGFSMGTAQ GLLCVAGVAC
CVAMAMPQVH IVAYCGDLGY GPAQGAQMLS LMLGFGVVSR LVSGAICDRI GGLRTLLLGG
ALQGVALLLF LPFDGLVSLY VISALFGLFQ GGIVPSYAII VREHFPPEEA GARVGTVLMF
TLFGMALGGW MSGKVFDLTG SYHAAFLNGI GWNLLNVSIA AMLLFRVRHL RLRTAAA
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