| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1058 |
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| Symbol | |
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| ID | 7969580 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 1157153 |
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| End bp | 1159720 |
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| Gene Length | 2568 bp |
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| Protein Length | 855 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644791654 |
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| Product | cyanophycin synthetase |
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| Protein accession | YP_002942975 |
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| Protein GI | 239814065 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0769] UDP-N-acetylmuramyl tripeptide synthase |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type
[TIGR02068] cyanophycin synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGTCA CCCGTATCCG CGCCTTGCGC GGCCCCAACC TCTGGAGCCG CCACACCGCC
ATCGAAGCGG TGGTTGCCTG CGAAGGCGAC GAGAACGCCA TCAGCCGCCT GCCGGGCTTC
GAAGCACGCC TGCGCGCGCT GTTCCCCCAC ATCGGCGAGC TGCATCCGAT GGTGCTGGGC
CAGCCGATGG CCCTGGCGCA CGTGCTCGAG AACGCCGCCG TGGCGCTGCA GGCCCAGGCC
GGCTGCGCGG TCAACTTCGG CCACACCTCG CCCACGGTGG AAGAAGGCGT CTACCAGGTC
GTGTTCCAGT ACAGCGAAGA GGCCGTGGGC CGGCGCGCCA TCGAACTGGC CGAACAGCTG
ATCGCGGCCG CGCAGGCCGA CACCGCCTTC GACGCCGCCG CCGCCATCAC CGAGCTGCGC
GACCTCGACG AGTCCGAGCG CCTGGGCCCG AGCACCGGCT CCATCGTCGA TGCCGCCGTG
GCGCGCGGCA TTCCCTACCG CCGCCTCACC AGCGGCAGCC TGGTGCAGTT CGGCTGGGGT
TCCAAGCAGC GCCGCATCCA GGCGGCCGAG GTCGACAGCA CCAGCGGCGT GGCCGAATCG
ATCGCGCAGG ACAAGGAACT CACCAAGCAG CTGCTCAATG CGGCCGGCGT GCCGGTGCCG
CTGGGCCGCC CGGTTTCGGA TGCGCAGGAC GGCTGGGCCG CGGCCATGGA GATCGGCCTG
CCCGTGGTGG TGAAGCCGCA GGACGGCAAC CAGGGCAAGG GCGTCACGGT CAACATCACG
ACCCAGGAGC AGCTCACCGC CGCCTACGAT TCGGCCGCCG CCTATGGCGA GGTCATGGTC
GAGAAATTCC TGCCGGGCTT CGACTTCCGC CTGCTGGTGG TGGGCGACCG CCTGGTGGCC
GCCGCGCGGC GCGATCCGCC GCACGTGATC GGCGACGGCA GCGCCACCGT GCGCCAGCTG
ATCGACGCCG TGAACCTCGA CCCGCGGCGC GGCGAAGGCC ATGCCACCTC GCTCACCAAG
ATCCGCCTGG ACGACATCGC CATCGGCCGC CTCGAGGCCC AGGGCCTCAC GCCCGACAGC
GTGCCCGCGC GCGGCCAGCG CGTGGTGCTG CGCAACAACG CCAACCTGTC CACCGGCGGC
ACCGCCACCG ACGTGACCGA CACCGTGCAC CCCGAAGTGG CCGCGCGCGC GGTCGATGCG
GCGCAGATGG TGGGCCTGCA CATCTGCGGC GTCGACATGG TCTGCGAGAA CGTGCTGCGC
CCGCTCGAGG AACAGCACGG CGGCGTGGTC GAGGTCAATG CCGCGCCCGG CCTGCGCATG
CACATCTCGC CCTCGTTCGG CCGCGGCCGC GCGGTGGGCG AGGCCGTCAT GGACACGCTG
TTCGCGCATG GCGACGACGG CCGCATTCCG GTGGTGGCCG TGACCGGCAC CAACGGCAAG
ACCACCACGG CGCGCCTCAT CAACCACCTG CTCGCATCCA GCGGCCTGCG CACCGGCATG
ACCAACACCG ACGGCGTGTA CGTCGACGGC CGCCAGACCG ACAGCGGCGA CTGCAGCGGC
CCCAAGAGCG CGCGCAACGT GCTCATGCAC CCCGACGTGG ATGCGGCCGT GTTCGAAGTG
GCGCGCGGCG GCGTGCTGCG CGAAGGCCTC GGCTTCGACC GCTGCCAGGT GGCCGTGGTC
ACCAACATCG GCAGCGGCGA CCACCTGGGC CTGAACTACA TCACCACCGT CGAAGACCTC
GCGGTGCTCA AGCGCGTGAT CGTGCGCAAC GTCGCGCCCG ACGGCTACGC AGTGCTCAAT
GCCGCCGACG TCAACGTCGC CGCCATGGCC GCCGGCTGCC CGGGCCACGT GATCTTCTTC
ACCGCCGACC GCCAGCACCC CGTGATGGCC ACGCACCGCG CGCAGGGCAA GCGCACCGTC
TACGTCGACC AGGACACGCT GGTGGCGGCC GAAGGCTCCT GGCGCGAGCG CATCGCGCTG
CGCGACGTGC CCATCACGCG CGGCGGCACC ATCGGCTTCC AGGTCGACAA CGTGATGGCG
GCCGTGGCCG CCGCATGGGC CGTGGGCCTG GACTGGGACA CCATCCGCAG CGGCCTCGCG
AGCTTCCTGA ACGACGCGGC CGGCGTGCCG GGGCGCTTCA ACGTCATGGA CTACCGCGGT
GCCACCGTGA TCGCCGACTA CGGCCACAAC ACCGACGCCA TGCGCGCGCT GGTCTCGGCC
GTGGACACCA TGCCGGCCAA CAAGCGCTCG GTGGTGATCA GCGGCGCGGG CGACCGGCGC
GATTCCGACA TCCGCGACCA GACCGCCATC CTCGGCCAGG CCTTCGACGA CGTGATCCTC
TACCAGGACG CGGCCCAGCG CGGCCGTGCC GACGGCGAGG TGATGGCGCT GCTGCGCCAG
GGCCTGCAGG GCGCGGCGCG CACGCGCTAC ATCGACGAGA TCCGCGGCGA ATTCGTTGCC
ATCGACACCG CGCTTGCGCG GCTGCAGCCG GGCGACCTGT CGCTGATCCT GGTCGACCAG
GTCGAGGAAG CGCTCGCGCA CCTCGCGCAG CGCATCGCGG CGGGCTGA
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| Protein sequence | MKVTRIRALR GPNLWSRHTA IEAVVACEGD ENAISRLPGF EARLRALFPH IGELHPMVLG
QPMALAHVLE NAAVALQAQA GCAVNFGHTS PTVEEGVYQV VFQYSEEAVG RRAIELAEQL
IAAAQADTAF DAAAAITELR DLDESERLGP STGSIVDAAV ARGIPYRRLT SGSLVQFGWG
SKQRRIQAAE VDSTSGVAES IAQDKELTKQ LLNAAGVPVP LGRPVSDAQD GWAAAMEIGL
PVVVKPQDGN QGKGVTVNIT TQEQLTAAYD SAAAYGEVMV EKFLPGFDFR LLVVGDRLVA
AARRDPPHVI GDGSATVRQL IDAVNLDPRR GEGHATSLTK IRLDDIAIGR LEAQGLTPDS
VPARGQRVVL RNNANLSTGG TATDVTDTVH PEVAARAVDA AQMVGLHICG VDMVCENVLR
PLEEQHGGVV EVNAAPGLRM HISPSFGRGR AVGEAVMDTL FAHGDDGRIP VVAVTGTNGK
TTTARLINHL LASSGLRTGM TNTDGVYVDG RQTDSGDCSG PKSARNVLMH PDVDAAVFEV
ARGGVLREGL GFDRCQVAVV TNIGSGDHLG LNYITTVEDL AVLKRVIVRN VAPDGYAVLN
AADVNVAAMA AGCPGHVIFF TADRQHPVMA THRAQGKRTV YVDQDTLVAA EGSWRERIAL
RDVPITRGGT IGFQVDNVMA AVAAAWAVGL DWDTIRSGLA SFLNDAAGVP GRFNVMDYRG
ATVIADYGHN TDAMRALVSA VDTMPANKRS VVISGAGDRR DSDIRDQTAI LGQAFDDVIL
YQDAAQRGRA DGEVMALLRQ GLQGAARTRY IDEIRGEFVA IDTALARLQP GDLSLILVDQ
VEEALAHLAQ RIAAG
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