| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1043 |
|---|
| Symbol | |
|---|
| ID | 7972014 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Variovorax paradoxus S110 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012791 |
|---|
| Strand | + |
|---|
| Start bp | 1140773 |
|---|
| End bp | 1142224 |
|---|
| Gene Length | 1452 bp |
|---|
| Protein Length | 483 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 644791639 |
|---|
| Product | Aldehyde Dehydrogenase |
|---|
| Protein accession | YP_002942960 |
|---|
| Protein GI | 239814050 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.414752 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGATTCACG GCGAGATCCA TCAGAACGTG CGGCAATACA TCAACGGCCG CTGGGAAACC
AGCGCGACCA CCGGTGTGAG CGCCAATCCT TCGGACACCA GCGAAGTGGT GGCCGAATAC
GCACGGGCCG ATCGCCGCCA GGTGGAGTCC GCGATCCGCG CAGCCGCCGA TGCCTTTTCC
CACTGGAGCC ACAGCACGCC GCAGCGCCGG GCCGACGTGC TCGACCGCAT CGGCACCGAA
CTCCTGGCGC GCAAGGACGA GCTGGGCCTG CTGCTGGCGC GCGAGGTTGG CAAGACCCTG
CCCGAGGCGG TGGCCGAGGC GGCGCGCGCG GGGCAGGTGT TCAAGTTCTT CGCGGGCGAG
GCACTGCGCG GCGGCGGCGA GAACATGGCC TCGCTGCGCG CAGGCGTGCA GGTCGACGTC
ACGCGCGAGC CGGTGGGCGT GGCCGGGCTC ATCACGCCGT GGAATTCGCC GCTCGCGGTG
CCGGCCACCA AGATTGCACC GGCGCTCGCG CACGGCAACT GCGTGGTGTT CAAGCCGGCC
GAGCTGGTGC CGGCCTGCGG CTGGACGCTG GCCGAGATCA TCAGCCGCGC GGCACTGCCC
GCGGGCGTGT TCAACCTCGT GATGGGCAGC GGCCGCGAAG CCGGCCAGGC GCTGGTCGAC
AGCCCGCTGG TCGATGCCCT GAGCTTCACC GGCTCGGCGC GCAACGGCGA ACGCATCCTG
CAGGCGGCCG CCGCGCGGCG CGCCAAGGTG CAGCTCGAGA TGGGCGGCAA GAACGCGCTC
GTGGTGCTGG CCGATGCCGA CATCGACCAC GCGGTCGACT GCGCGGTGCA GGGCGCCTAT
TTTTCCAACG GCCAGCGCTG CACGGCGTCG AGCCGGCTGA TCGTCGAGGC CGCGGTGCAC
GATGCCTTCG TCTCGCGGCT TCGCGAGCGG CTCAAGGCGC TGAAGATCGG CCATGCGCTC
GAACGCGGCG TCGACGTCGG GCCGCTGGTC GATGAAGAGC GCCTCGCGCG CAGCCTGGCC
TGGGTCGGCA TTGCGCGCGA AGAGGGCGCT GAGCATGTGT GGGGCGGCGA GCCGCTCCAG
CGCGCCACGG CCGGCCACTA CATGAGCCCC GCGCTGTTCC TGGCCCAGCC CGGGCACCGC
ATCGCGCGCG AGGAAATCTT CGGCCCGCTG GCCTGCGTGC TGCGCGCGGC CGACTACGAC
GAGGCGCTGG CGCTGTGCAA CGACACGCCT TCGGGCCTGA GCGCGGGCAT CTGCACCAAT
TCGCTCAAGC ACGCGATGCA TTTCAGGCGC CATGCCGAAG TCGGCATGAC GATGGTCAAC
CTGCCGACGG CGGGCGTGGA CTTCCACGCG CCCTTCGGCG GGCGCAAGGG GTCGGGCTAC
GGGCCGCGCG AACAAGGGCG CCATGCCGCG GAGTTCTACA CGACGGTCAA GACCGGCTAC
ATGCTGGCCT GA
|
|---|
| Protein sequence | MIHGEIHQNV RQYINGRWET SATTGVSANP SDTSEVVAEY ARADRRQVES AIRAAADAFS
HWSHSTPQRR ADVLDRIGTE LLARKDELGL LLAREVGKTL PEAVAEAARA GQVFKFFAGE
ALRGGGENMA SLRAGVQVDV TREPVGVAGL ITPWNSPLAV PATKIAPALA HGNCVVFKPA
ELVPACGWTL AEIISRAALP AGVFNLVMGS GREAGQALVD SPLVDALSFT GSARNGERIL
QAAAARRAKV QLEMGGKNAL VVLADADIDH AVDCAVQGAY FSNGQRCTAS SRLIVEAAVH
DAFVSRLRER LKALKIGHAL ERGVDVGPLV DEERLARSLA WVGIAREEGA EHVWGGEPLQ
RATAGHYMSP ALFLAQPGHR IAREEIFGPL ACVLRAADYD EALALCNDTP SGLSAGICTN
SLKHAMHFRR HAEVGMTMVN LPTAGVDFHA PFGGRKGSGY GPREQGRHAA EFYTTVKTGY
MLA
|
|---|
| |