Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_1014 |
Symbol | |
ID | 7971985 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | - |
Start bp | 1109929 |
End bp | 1110912 |
Gene Length | 984 bp |
Protein Length | 327 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644791610 |
Product | precorrin-3B C17-methyltransferase |
Protein accession | YP_002942931 |
Protein GI | 239814021 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1010] Precorrin-3B methylase |
TIGRFAM ID | [TIGR01466] precorrin-3B C17-methyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.4176 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGGCA AGATTTCATT GGTCGGCATC GGGCCCGGCC ACCACGACCA CATGACGGGC CGCGCGCTGG CCGCGATCGC CGAAGCCGAC GTGGTGGTCG GCTACAGCAC CTACATCAAG CTGGTGGCCG ACCTGCTCGA GGGCAAGGAA GTGATCCGCA AGGGCATGAC CGAGGAGCTC GACCGCGCGG TCAATGCGCT CGAATGTGCC CGCGAGGGCA AGAAGGTGGC GCTGATCTCC AGCGGCGATG CCGGCGTCTA CGGCATGGCC GGCCCGACCT ACGAGGTGCT GTTCCAGGCC GGCTGGACGC CGGACTCCGA CATCGCCGTC GAGGTGGTGC CCGGCGCGTC GGCCATCAAC GCCTGCGCGG CGCTGGTGGG CGCGCCGCTC ACGCACGACT TCTGCTCGAT CTCGCTGAGC GACCTGCTCA CGCCCTGGCC CGTGATCGCG CGGCGGCTCG ACGCGGTGGC GGCGGCCGAC TTCGTGGTGG CTCTCTACAA CCCGAAGAGC GGGCGGCGCA CCCAGCAGAT CGTGCAGGCG CAGCAGCTCT TCCTGCGGCA CCGGCGGCCG GACACGCCGG TGGCGGTGGT CAAGTCGGCC TACCGCCGGC GCGAGCGCAT CGAGTTCACC ACGCTTGCCC ACATGAGCGA GTGCGACATC GGCATGCTGA CGACGGTGCT CATCGGCAAC AGCCACACCT TCGTGCAGCA CGGCCTCATG GTCACGCCGC GCGGCTATGC CAACAAGTAC GACCTGGACG ATGGCGGCAA CACGCGCAGC GGCGAGAAGC CAGGCCGCTC GCTGTCGACC GGCCTGCTGG GCTGGATGGC CAACCTGCGC GCCGACCATG CCGAAGGCGC GAGCGCCGCC GCGCTGGCGG CGCAGCACCG CCTGCCCGTC GATTACATCG AGGCCGTGCT GGCCGCACCG GCCGAGGAAG AAGAAAGCCC CGCGGCCGCG CCGCTCGAGG AGACGCAGGA ATGA
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Protein sequence | MSGKISLVGI GPGHHDHMTG RALAAIAEAD VVVGYSTYIK LVADLLEGKE VIRKGMTEEL DRAVNALECA REGKKVALIS SGDAGVYGMA GPTYEVLFQA GWTPDSDIAV EVVPGASAIN ACAALVGAPL THDFCSISLS DLLTPWPVIA RRLDAVAAAD FVVALYNPKS GRRTQQIVQA QQLFLRHRRP DTPVAVVKSA YRRRERIEFT TLAHMSECDI GMLTTVLIGN SHTFVQHGLM VTPRGYANKY DLDDGGNTRS GEKPGRSLST GLLGWMANLR ADHAEGASAA ALAAQHRLPV DYIEAVLAAP AEEEESPAAA PLEETQE
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