Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_0840 |
Symbol | |
ID | 7972055 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | - |
Start bp | 925945 |
End bp | 926766 |
Gene Length | 822 bp |
Protein Length | 273 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644791438 |
Product | enoyl-CoA hydratase |
Protein accession | YP_002942759 |
Protein GI | 239813849 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0193834 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGACG ACAACAAGAC CGTTCTGATC TCGCAGCAGG GCGCCGTCCG CATCCTGACC AACAGCAACC CCGGCGCGCG CAATGCAATC ACGCCGACGC TGTACGCGGA ACTGAGCGCC GCGCTCGCCG ATGCGCAAAA CGACCCCGAA GTCGGCGCCG TCGTCTTCAC CGGCGCGGGC GATTTCTTCT GCTCGGGCGG CGACCTCAAT CTTCTGGCCA AGCGCCGCGA GCTGCCCGCC TCCGAGCGCC GCGAAAAGCT CGAAGGCCTG CACGACCTGA TCCGCGGCAT CCGCGATTGC GCCAAGCCGG TGATCGCGGC CGTCGAAGGC GGCGCGGCGG GCGCGGGCCT CTCGATGGCG CTGGCCTGCG ACATGCTGGT GTCGGCGCGC GACGCGTTCT ACACGGTGGC CTACGTCAAG GTCGGCCTCA CGCCCGACGG CGGCGCCACG GCCTTCCTTG CGGAGTTCGT CTCGCGCCAG GTGCTGACCG AGATGTGCCT GACCGGCGAC CGCATGACGG CCGAGCGCCT GCATGCGCTG GGCGCGGTCA ACCGGCTGAC CGACAAGGGC GCCGCGCTGG CCGAGGCCAT CGCGCTCGCG GCCAAGGTGG CCGACGGCCC CGAGCGCGCG ATCGCACGCA TCAAGACGCT GTGCCGCCAG GCGCACCGCG CCACGCTCGA GCAGCAGCTC GATGCCGAGG CCGTGTACAT GGTCGAGTCG CAGGCCGATG CCGAGGCGGC CGAAGGCATC GGTGCCTTCC TCGGCAAGCG GCGCGCGGAT TTCAACGCGC TGCGCCGCAA GACAAAGCCG GACGCGTCCT GA
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Protein sequence | MSDDNKTVLI SQQGAVRILT NSNPGARNAI TPTLYAELSA ALADAQNDPE VGAVVFTGAG DFFCSGGDLN LLAKRRELPA SERREKLEGL HDLIRGIRDC AKPVIAAVEG GAAGAGLSMA LACDMLVSAR DAFYTVAYVK VGLTPDGGAT AFLAEFVSRQ VLTEMCLTGD RMTAERLHAL GAVNRLTDKG AALAEAIALA AKVADGPERA IARIKTLCRQ AHRATLEQQL DAEAVYMVES QADAEAAEGI GAFLGKRRAD FNALRRKTKP DAS
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