Gene Vapar_0840 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_0840 
Symbol 
ID7972055 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand
Start bp925945 
End bp926766 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content71% 
IMG OID644791438 
Productenoyl-CoA hydratase 
Protein accessionYP_002942759 
Protein GI239813849 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0193834 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGACG ACAACAAGAC CGTTCTGATC TCGCAGCAGG GCGCCGTCCG CATCCTGACC 
AACAGCAACC CCGGCGCGCG CAATGCAATC ACGCCGACGC TGTACGCGGA ACTGAGCGCC
GCGCTCGCCG ATGCGCAAAA CGACCCCGAA GTCGGCGCCG TCGTCTTCAC CGGCGCGGGC
GATTTCTTCT GCTCGGGCGG CGACCTCAAT CTTCTGGCCA AGCGCCGCGA GCTGCCCGCC
TCCGAGCGCC GCGAAAAGCT CGAAGGCCTG CACGACCTGA TCCGCGGCAT CCGCGATTGC
GCCAAGCCGG TGATCGCGGC CGTCGAAGGC GGCGCGGCGG GCGCGGGCCT CTCGATGGCG
CTGGCCTGCG ACATGCTGGT GTCGGCGCGC GACGCGTTCT ACACGGTGGC CTACGTCAAG
GTCGGCCTCA CGCCCGACGG CGGCGCCACG GCCTTCCTTG CGGAGTTCGT CTCGCGCCAG
GTGCTGACCG AGATGTGCCT GACCGGCGAC CGCATGACGG CCGAGCGCCT GCATGCGCTG
GGCGCGGTCA ACCGGCTGAC CGACAAGGGC GCCGCGCTGG CCGAGGCCAT CGCGCTCGCG
GCCAAGGTGG CCGACGGCCC CGAGCGCGCG ATCGCACGCA TCAAGACGCT GTGCCGCCAG
GCGCACCGCG CCACGCTCGA GCAGCAGCTC GATGCCGAGG CCGTGTACAT GGTCGAGTCG
CAGGCCGATG CCGAGGCGGC CGAAGGCATC GGTGCCTTCC TCGGCAAGCG GCGCGCGGAT
TTCAACGCGC TGCGCCGCAA GACAAAGCCG GACGCGTCCT GA
 
Protein sequence
MSDDNKTVLI SQQGAVRILT NSNPGARNAI TPTLYAELSA ALADAQNDPE VGAVVFTGAG 
DFFCSGGDLN LLAKRRELPA SERREKLEGL HDLIRGIRDC AKPVIAAVEG GAAGAGLSMA
LACDMLVSAR DAFYTVAYVK VGLTPDGGAT AFLAEFVSRQ VLTEMCLTGD RMTAERLHAL
GAVNRLTDKG AALAEAIALA AKVADGPERA IARIKTLCRQ AHRATLEQQL DAEAVYMVES
QADAEAAEGI GAFLGKRRAD FNALRRKTKP DAS