Gene Vapar_0706 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_0706 
Symbol 
ID7974669 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand
Start bp769285 
End bp769719 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content69% 
IMG OID644791305 
ProductCBS domain containing protein 
Protein accessionYP_002942626 
Protein GI239813716 
COG category[R] General function prediction only 
COG ID[COG0517] FOG: CBS domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTCAGG TTCATGAAGT GATGACGCGC GGCGTGCGCA CGGTGGCGCC GGGCGACACC 
ATCGTGCAGG CCGCCAAGGC CCTGGAAGAA CTCGAAGTGG GCGTGCTGCC GGTGTGCGAC
GGCAGCCGGC TGGTCGGCGT GGTGACCGAC CGCGACATTG CCGTGCGCGG CGTGGCCCGC
GAGATCGACC TTGGCGCATC GCCGGTCAAG CAGATCATGA CCGCCGACGC GTACTGGTGC
TATGCCGACG ACACGGTCGA CGAGGCGCTC AGCCAGATGA GCGCGGTGCA GATCCGCAGG
CTTCCGGTGG TCGACCGCGA CAAGCGCCTC GTGGGCATCC TGTCGCTGGG CGACGTGGCG
GCCAAGGGCG AGGCCGGCGC GGCGGCCGAT CCGCTCGGAA AGATCTCCGA GCCTGCGCGG
CCGAAGCACT TGTAG
 
Protein sequence
MTQVHEVMTR GVRTVAPGDT IVQAAKALEE LEVGVLPVCD GSRLVGVVTD RDIAVRGVAR 
EIDLGASPVK QIMTADAYWC YADDTVDEAL SQMSAVQIRR LPVVDRDKRL VGILSLGDVA
AKGEAGAAAD PLGKISEPAR PKHL