| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0703 |
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| Symbol | |
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| ID | 7974666 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 763460 |
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| End bp | 765610 |
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| Gene Length | 2151 bp |
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| Protein Length | 716 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644791302 |
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| Product | Amylo-alpha-16-glucosidase |
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| Protein accession | YP_002942623 |
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| Protein GI | 239813713 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3408] Glycogen debranching enzyme |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACATGA GCGCCGAAGT GCCTGCCTCC GAGCAGGCCG AGCCCGCGCC CGAGCGCGCG
GTGCAGCATG CCTTTGTGCT CAAGGAGGGC GACACCTACT TCGTGATGGA CGGCCACGGC
GACGTGGGCG GCGGCGTGGA CGGGCTCTTC CACGACGACA CGCGCATGCT GTCGACCTTC
GTGCTCCGGC TGGGCGGTGC GCGGCCGCCG CTTCTGTCCA GCGGCGTGAG CCACGACAAC
GTCTTCTTCA CCGCCAACCT CACCAACCGG CCGCTGCCGG TGCTCGGGTC GACCTCGATG
CCGCAGGGCG TGATCCACAT GGAGCGCAAG CGCTTTCTCT GGGGAGCGCG GCTGTTCGAG
CGCATCCGGC TGGTCAACTA CGGCGACCAG CCCGCGCAGG CGCCGCTCAC GCTGCAGTTC
GGCGCCGACT TCCGCGACAT GTTCGAGGTC CGCGGCCAGC GGCGCGCACG GCGCGGCGAG
ATCGGCCCGC CCGAGGTCGG CGCGCAGGGC GTGGTGCTGC GCTACCAGGG ACTGGACACC
GTCACGCGGC TGGCCTGCAT CGATTTTTCC GAGGCGCCGC AGCGCCTGGA CGCGGGCACC
GCGGAATTCA GGGTGCCGCT GGCCGCGCGC GGCCACTGGA CGCTCTACCT GGAGGTGGGC
ACGGCACCCG CGCGGCCCGG CGCCCAGCGC TTCCGCGAGG CCGGCGTGCT CGCGCGCTGG
CGCATGCGCC AGCGGCAACG GCGCGGCTCG CGGCTGCACG CCTCGGGGCG CCTGTTCCAG
GCCTGGCTCG ACCGCTCGCG CGCCGACCTC GCGCTGCTCA CCACCGACCT GCCCACCGGC
CCCTATCCCT ACGCGGGGAT CCCGTGGTTC TCGACGCCGT TCGGACGCGA CGCCATCGTC
ACGGCCTTCC AGACGCTGTG GATCGACCCG AGGCTGGCGC AGGGCGTGCT CGAATTCCTG
GCGGCGCGGC AGGCGCACCA GACCTCGAGC TTCCGCGATG CGGAGCCCGG AAAGATCATG
CACGAGACCC GCAAGGGCGA GATGGCCGCC GTCGACGAAC TGCCCTTCGG CCAGTACTAC
GGCGGCGTCG ACACCACGCC GCTGTTCGTG GCGCTGGCCG GCGCCTATGC ACGGCGCACC
GGCGACCGCG CCACCATCGA CCGCATCTGG CCCGCACTCG GCGCGGCCTG TGAATGGATG
GAGCGGAACA TGGCGCGCCA CCCCGACGGC CTGCTCGCCT ACCAGCGCGG CGAAGCCAGC
GGCCTGGTCA ACCAGGGCTG GAAGGACAGC CACGATTCCA TCTTCCACGC CGACGGCCGC
ACACCCGAAG GGCCGATCGC GCTGGTCGAA GTCCAGGGCT ATGCCTATGC GGCCTTCCTT
GCGATGTCGG CCATGGCCGA GTGGCGCGGC GATGCGGGCG CGAGCCGCTG GCGCCAGCGC
GCGGCGGCCA TGCGGCTTGC GGTCGAGAGC CGGTTCTGGC TCGACGACCT GGGCTTCTAT
GCGCTGGCCA TCGACGGCGC CAACCAGCCT TGCCGCGTGC GTGCTTCCAA CGCGGGCCAC
CTGCTGTTCG CCGGCCTGCC GAGCGCAGAG CGGGCCCAGG CCGTGGGCCG CCAGCTGCTG
TCGTCGGCCT TCGCATCGGG CTGGGGCGTC CGCACCCTGC CGGCGGAGGC GGTGCGCTTC
AATCCGATGT CCTATCACAA CGGATCGGTG TGGCCGCACG ACGCGGCCCT GTGCGCGGCC
GGCCTCGCGC GCTACGGCGA GCGCGACGGC GTGGTGCGCA TCCTGGACAG CCTGTTCGAG
TCGGCCACCC ACTTCGGCAT GCGGCTGCCG GAACTGTTCT GCGGCTTCGA CCGCGAGCCG
GGCCAGTCGC CCGTGGCCTA TCCGGTGGCA TGCCTGCCGC AGGCCTGGGC CGCGGGCTCG
GTGTTCATGC TGCTGCAGGC CTGCCTTGGC CTGCAGGTGG ACGGCATCCG GCGCGAGGTG
AAGATCGTGC AGCCGCGGCT GCCGGCCGAC ATCGACCAGC TGCACGTGCA GCGGCTGCAG
GTGGGCCACG CGCGGGTGGA CCTGCATTTC CAGCGGCTCG AGGAGCGCAT CGTGGTGGTC
GCGCAAACGG CGCCCGGCAC GCCCGGCGTC CAGGTCAACC TGCAGCTCTA G
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| Protein sequence | MNMSAEVPAS EQAEPAPERA VQHAFVLKEG DTYFVMDGHG DVGGGVDGLF HDDTRMLSTF
VLRLGGARPP LLSSGVSHDN VFFTANLTNR PLPVLGSTSM PQGVIHMERK RFLWGARLFE
RIRLVNYGDQ PAQAPLTLQF GADFRDMFEV RGQRRARRGE IGPPEVGAQG VVLRYQGLDT
VTRLACIDFS EAPQRLDAGT AEFRVPLAAR GHWTLYLEVG TAPARPGAQR FREAGVLARW
RMRQRQRRGS RLHASGRLFQ AWLDRSRADL ALLTTDLPTG PYPYAGIPWF STPFGRDAIV
TAFQTLWIDP RLAQGVLEFL AARQAHQTSS FRDAEPGKIM HETRKGEMAA VDELPFGQYY
GGVDTTPLFV ALAGAYARRT GDRATIDRIW PALGAACEWM ERNMARHPDG LLAYQRGEAS
GLVNQGWKDS HDSIFHADGR TPEGPIALVE VQGYAYAAFL AMSAMAEWRG DAGASRWRQR
AAAMRLAVES RFWLDDLGFY ALAIDGANQP CRVRASNAGH LLFAGLPSAE RAQAVGRQLL
SSAFASGWGV RTLPAEAVRF NPMSYHNGSV WPHDAALCAA GLARYGERDG VVRILDSLFE
SATHFGMRLP ELFCGFDREP GQSPVAYPVA CLPQAWAAGS VFMLLQACLG LQVDGIRREV
KIVQPRLPAD IDQLHVQRLQ VGHARVDLHF QRLEERIVVV AQTAPGTPGV QVNLQL
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