| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0669 |
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| Symbol | |
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| ID | 7974632 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 730456 |
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| End bp | 731313 |
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| Gene Length | 858 bp |
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| Protein Length | 285 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 644791271 |
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| Product | GAF modulated transcriptional regulator, LuxR family |
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| Protein accession | YP_002942592 |
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| Protein GI | 239813682 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.395168 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGAAAA TACTAGGGGA TAGGTCGAGG AGCTTCATCC CTCCAAATGG AGGGATGAAT
GGCCGCACAC AGGCGCGCAG GTGGAACGAG CTTTCTGCGT TAGACGATTG CTTTTTGTTG
ACTGATGCCG TCTTGGAGAT CACAACAACT GTTGATCACA AACTTCTCGC CATCACTGCG
GTGGACATAG GACAGCGCTT GTTCGGTGCC GCTGCCGCGG GCTACTTTCT GTTCGATGGA
AGCGGTACGT TCCCGCAACT TGTCCATGCC AAGGGGGCTG CAGCCGGGTT CGTCGATGAG
TACGAGCACA GTTTGAGGCG AGTGGACCCG GTGTTGCGAC TAGTACGGAG AAGCGGTCGC
GCCGCAAGCG CGCGCTGCGC CATCACACCT GGTGACTGGG GCAACGCCGC CATTGCTGGG
CATCTCAAGC GATGGGGATA TGGCGACTCG ATGCAGGGTC CACTACATTG TGGCGGACGG
ATTGCTGGAA CCCTTAACGT GGTGAGGCAG CGCGATGACT ATCCGTTTGG TGTCAGTGAT
CTCGCTGCAT TCGAGAGGGT GTGCCGAGCC TTGTCGAATG CGTTGGATAT TGCTATGCGA
CTTACTTCCG CGGCATCAGA TTACACGCTT ACCAACCCCG GCGGCCATTT GATGACGCTG
GAGGGGCGCG CCAGAGACGT CGGATGGCTC GTCCTCGATG GAGCGACGAA CAAAGCAATC
GCGCGGCAGC TTGGCATCTC TGAGCTGACA GCCAAGGAGC ATGTGGAGCG GTTGCGGGCG
CGCTTCGGAG CGGCCAACCG GACTCAACTC GCGGCGTGTC TAGCGCAGCA CCTCGTTCGT
CCTGCAAAAA GCGGATAA
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| Protein sequence | MAKILGDRSR SFIPPNGGMN GRTQARRWNE LSALDDCFLL TDAVLEITTT VDHKLLAITA
VDIGQRLFGA AAAGYFLFDG SGTFPQLVHA KGAAAGFVDE YEHSLRRVDP VLRLVRRSGR
AASARCAITP GDWGNAAIAG HLKRWGYGDS MQGPLHCGGR IAGTLNVVRQ RDDYPFGVSD
LAAFERVCRA LSNALDIAMR LTSAASDYTL TNPGGHLMTL EGRARDVGWL VLDGATNKAI
ARQLGISELT AKEHVERLRA RFGAANRTQL AACLAQHLVR PAKSG
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