| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0626 |
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| Symbol | |
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| ID | 7973611 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 682552 |
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| End bp | 683541 |
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| Gene Length | 990 bp |
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| Protein Length | 329 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 644791233 |
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| Product | transcriptional regulator, AraC family |
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| Protein accession | YP_002942554 |
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| Protein GI | 239813644 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.902916 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCGCCG CCCCTGGCGT CGACGCCTCG CCCCTCTATC GGCGGCGGGT GTTTCGCTCG
ACCAACCCCC AGGAGGCCCG CGCGGTGCAC GGCCGCTGGA TCGCGGACCA CGAACTGCGC
ATCGGGCAGG GCGAGGTCGA CGCCTCGCTG TGCGCGCTCC CGCTGCGCTC GGTCCACATG
CTGCTGATCC GCTACGGCCC CGAGGCGGAA ATCCTGAGCC CCGCGTTCGA CGACTTCTCG
CTGATCCAGA TCCCGTTGAG TGGGAGCGCC GACATCGTCT GCGATGGCCA GGCGCTGTCG
CTGGACAGCG GGCAGTCGGC GCTGCTGTCG CCGCGCCGCG CCCTGCGCGT GCGCTGGAGC
CCCGGCAGCG AGCAGTTGCT GCTGCGGGTG CCACACGCGC TGTTGCGAGC CACCGCCAGC
GACACCGGGC TCGGGCCCGA TGCCGCCAGC GGCGCGCCGC CCTGGCCGGC CCCGCTCGCC
ATCATCGACC GCGTCGCCGG CGCGCGCTGG CGGCCGATCG TGCAGTCCCT CATCGCGCTC
GGCCCGTCCA CCGAGGACGC GCGCGGCGCG CACCCGGCCT GGGAGCGGCA CTGCGAAACG
GGCCTGGCAT TGTTCCTGTT AACGCTCGCG AGCGAGCAGG CGGGCGCGGG CCTGGCAGCG
CCGTGCGGCC ACAGCGGCGT GCTCAAGGCC GCGGGCCGCT ACATCCAGGC CAACCTCGCC
TCGCCCATCG CGCTGGGCGA CGTGGCGCAG GCCGCGGGCG TCAGCGAACG CACGCTGCAC
ACGCACGTCA CGCGCGCCTT CGGCGTGCGT CCCATGGCCT GGCTCAGGCT GCAGCGGCTC
GACGCCGCGC GCGCTCAACT CAGGCGCGGG GAAGCGCCCT CCATCGCCGA GGTCGCGCTG
CGCTGCGGCT TCGCCCACCT GGGGCGCTTC GCCGCCTACT ACCGCGAACG CTTCGGCGAA
CTGCCCAGCG AGACACAAGC CTCGCCCTGA
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| Protein sequence | MSAAPGVDAS PLYRRRVFRS TNPQEARAVH GRWIADHELR IGQGEVDASL CALPLRSVHM
LLIRYGPEAE ILSPAFDDFS LIQIPLSGSA DIVCDGQALS LDSGQSALLS PRRALRVRWS
PGSEQLLLRV PHALLRATAS DTGLGPDAAS GAPPWPAPLA IIDRVAGARW RPIVQSLIAL
GPSTEDARGA HPAWERHCET GLALFLLTLA SEQAGAGLAA PCGHSGVLKA AGRYIQANLA
SPIALGDVAQ AAGVSERTLH THVTRAFGVR PMAWLRLQRL DAARAQLRRG EAPSIAEVAL
RCGFAHLGRF AAYYRERFGE LPSETQASP
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