| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0540 |
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| Symbol | |
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| ID | 7972950 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 600541 |
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| End bp | 601710 |
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| Gene Length | 1170 bp |
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| Protein Length | 389 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 644791143 |
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| Product | hypothetical protein |
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| Protein accession | YP_002942469 |
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| Protein GI | 239813559 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAACC AAGTCTATGC CAACAACATG GAGATATCGT GCAAGCAGGC GGCGGGCAAG
TCGGTCTGCG CGTTCCCGGA TGTGTGCTTC ACGCCGCCGC AGACGCCGGC AACGCCGCCC
GGCGTGCCGA TCCCGTATCC GAACACCGGC ATGGCCACCG ACACGAGCGA TGGTTCGACG
ACCGTGCAGA TATCAGGCCA GGAGGTGATG CTCAAGAACA AGAGCTATTT CAAGAAAAGC
ACCGGAGACG AGGCGGGATG CGCGCCCAAG AAGGGGGTCG TGACCAGCAA GAACATGGGG
AAGGTGTACT TCAACGCGTG GTCGATGGAC GTCAAGGTGG AGGGCGAGAA CGTTGTGCGC
AATGTCGACC TCACCACGCA CAACCATGCA TCGTCGCCGG GGAATGCGCC GCCCTGGCCG
TACATCGACG AAGCAGCGTT TGCAGGCACC GGTCCATGCA AGGACGTGGC AAAGGCACTG
ACGGACAAAT GCGGGCCTCC GCCCAAGCCG CACCAACGCA AGGGCTGGGT CAAGAAAATG
TGCGACAACC CGGACTCCTC GTGCCGAGAC GCCATGAAGT GCGTCCTGTC GCCTTACGCC
CCAAGCGCCA AGCACAGCGA TGGAAAGAAT TCGCAAGGCA ATTGCTGCCC GGGAAAAACG
CCGCATCACC TGATCGAGGT CCATTGCTTT ACGCCGATCG GCGGCAGAGA AGGAGGACAT
GTCATGTCCG AATTCAAGAA TGCAAGCGGG GAGGGGTACA ACCAGGGAGC CGCTCCATGT
ATGTGCGTCG ATGGTCCACG AGAGGCCAAG CAGCATGGTG AGTTTCATGC GGTGCAGCAG
CAAATCGAAA CGGCCTACAA CAAGCGCCTT TTTGCGCCCA AGACAGTGAT GAGCGACGGC
AAAGGCATCT CGAACTGGAC CTATGGCGAA GCCAGGGATG CGGGTGTCGC TGCCCAGACG
ATCGTCATGC CCGAATGCGA CCCGGAATGC ACCAAGGCGC AACTCGACGA CTATCACAAG
AAGCCTCCGC CGGATGGCCC CGGATGCGAT GAGCACACGC CGGTGCGATC GGACATGGGG
TCCGATGGCC GCTCGACGGG TACGTTGAAT TCCGGCCAGG AGGCAAAACT TGGCCGGCGC
TTGCTCACGG TGCTTGCCAA GGGCTTCTGA
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| Protein sequence | MSNQVYANNM EISCKQAAGK SVCAFPDVCF TPPQTPATPP GVPIPYPNTG MATDTSDGST
TVQISGQEVM LKNKSYFKKS TGDEAGCAPK KGVVTSKNMG KVYFNAWSMD VKVEGENVVR
NVDLTTHNHA SSPGNAPPWP YIDEAAFAGT GPCKDVAKAL TDKCGPPPKP HQRKGWVKKM
CDNPDSSCRD AMKCVLSPYA PSAKHSDGKN SQGNCCPGKT PHHLIEVHCF TPIGGREGGH
VMSEFKNASG EGYNQGAAPC MCVDGPREAK QHGEFHAVQQ QIETAYNKRL FAPKTVMSDG
KGISNWTYGE ARDAGVAAQT IVMPECDPEC TKAQLDDYHK KPPPDGPGCD EHTPVRSDMG
SDGRSTGTLN SGQEAKLGRR LLTVLAKGF
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