| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0539 |
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| Symbol | |
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| ID | 7972949 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 599513 |
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| End bp | 600544 |
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| Gene Length | 1032 bp |
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| Protein Length | 343 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644791142 |
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| Product | 3-oxoacyl-(acyl carrier protein) synthase |
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| Protein accession | YP_002942468 |
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| Protein GI | 239813558 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATTCGC GTGCAATCGC CATTCTTCGC AGCGGCCTGG TGACGCCGGT GGGGCTGGAC
GCCGAATCGA GCTGCGCCGC GTTCCGGGCC AAGCTGACGA ACCCCGTCGA GACGCGCTTC
ATCGACGCGG GCGGAGAGTG GATCATGGCG CACGAGGTGC CGCTGACGCC TTTGTGCCGC
GGGCTCCCCA AGCTGACAAG GATGGCCGCC ATGGCAATCG AGGAAGCGTT GGGAGAAGTG
CCACGCAGCC AGTGGGGACA GTTGCCCTTG ATTCTCTGCG TGGCGGAGCC GATGCGGCCC
GGACGGACAC CGGGGCTGGA CGACGAGCTC TTCCTGCAGA TACAGGAAGA GCTCGGCACT
GCCTTTGCGC CCCAATCGCA GATCGTCGCG CAGGGCCGTG TCGGGGTTGC CGTGGCGTTC
GCGCAGGCGC GTGCGCTATT GATCGAGTCC GGCATGCCAC AAGTGCTTGT TGCCGCTACG
GACAGCCTGC TCTCATGGTC GACGCTGAGC CACTACGAGC AGAGTGATCG CCTGCTGACG
GCCCGAAATT CCAATGGCTT CATGCCGGGC GAGGCGGCCG GCGCGATGTT GCTGGGTGAA
CCGGAGGGAA ACGCGGGAGA ACTGCTCTGC ACCGGCGTCG GATTCGGTCT CGAAGAGGCT
CATGTCGAAA GCGAGGTGCC GCTGCGCGCC GAGGGGCTCT CCCAGGCCGT CAAGGCTGCG
CTGGCCGATG CGGGGTGCCA GATGCATCAG ATGGACTTCC GCATCACCGA TCTTTCGGGA
GAACAGTACT ACTTCAAGGA GGCTGCGCTG GCACTCTCGC GCACGTTGCA TGTCCGAAAG
AAGGAGTTTG ACATCTGGCA TCCCGCCGAA TGCACTGGCG AGATCGGCGC CGCGGTAGGG
CTCGCCATCG TTTCTGCGGC CCAGGCTGCC TGCGAGAAAC AGTACGCCAA GGGGCCGAAT
ATCCTCGCGC ACTTGGCCAA CGACGCGGGG CAGCGAGCGG CGCTCTGCCT GCAGTATCGG
ATGCCGGTAT GA
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| Protein sequence | MNSRAIAILR SGLVTPVGLD AESSCAAFRA KLTNPVETRF IDAGGEWIMA HEVPLTPLCR
GLPKLTRMAA MAIEEALGEV PRSQWGQLPL ILCVAEPMRP GRTPGLDDEL FLQIQEELGT
AFAPQSQIVA QGRVGVAVAF AQARALLIES GMPQVLVAAT DSLLSWSTLS HYEQSDRLLT
ARNSNGFMPG EAAGAMLLGE PEGNAGELLC TGVGFGLEEA HVESEVPLRA EGLSQAVKAA
LADAGCQMHQ MDFRITDLSG EQYYFKEAAL ALSRTLHVRK KEFDIWHPAE CTGEIGAAVG
LAIVSAAQAA CEKQYAKGPN ILAHLANDAG QRAALCLQYR MPV
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