16 homologs were found in PanDaTox collection
for query gene Vapar_0539 on replicon NC_012791
Organism: Variovorax paradoxus S110



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_012791  Vapar_0539  3-oxoacyl-(acyl carrier protein) synthase  100 
 
 		 343 aa  696    Variovorax paradoxus S110  Bacteria  normal  1  n/a   
 
 
-
 
NC_009439  Pmen_2335  3-oxoacyl-(acyl carrier protein) synthase  56.8 
 
 		 345 aa  367  1e-100  Pseudomonas mendocina ymp  Bacteria  decreased coverage  0.00405525  normal  0.0104415 
 
 
-
 
NC_008463  PA14_01190  3-oxoacyl-(acyl carrier protein) synthase  56.76 
 
 		 345 aa  345  4e-94  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.221969  normal  1 
 
 
-
 
NC_009656  PSPA7_0172  3-oxoacyl-(acyl carrier protein) synthase  55.88 
 
 		 345 aa  343  2e-93  Pseudomonas aeruginosa PA7  Bacteria  normal  1  n/a   
 
 
-
 
NC_008686  Pden_2438  3-oxoacyl-(acyl carrier protein) synthase  37.35 
 
 		 354 aa  173  2.9999999999999996e-42  Paracoccus denitrificans PD1222  Bacteria  normal  0.091366  normal  0.305861 
 
 
-
 
NC_002939  GSU3181  3-oxoacyl-(acyl carrier protein) synthase  29.58 
 
 		 347 aa  103  5e-21  Geobacter sulfurreducens PCA  Bacteria  normal  1  n/a   
 
 
-
 
NC_009050  Rsph17029_3113  3-oxoacyl-(acyl carrier protein) synthase  33.18 
 
 		 363 aa  87.8  3e-16  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.484241  normal  0.133008 
 
 
-
 
NC_007494  RSP_3468  3-oxoacyl-(acyl carrier protein) synthase  33.18 
 
 		 363 aa  86.3  7e-16  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.401945  n/a   
 
 
-
 
NC_002939  GSU3168  3-oxoacyl-(acyl carrier protein) synthase  27.17 
 
 		 397 aa  79.7  0.00000000000007  Geobacter sulfurreducens PCA  Bacteria  normal  1  n/a   
 
 
-
 
NC_010524  Lcho_4077  hypothetical protein  29.1 
 
 		 395 aa  65.1  0.000000002  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.0000000344983 
 
 
-
 
NC_011989  Avi_3386  beta-ketoacyl synthase domain-containing protein  26.64 
 
 		 351 aa  53.9  0.000004  Agrobacterium vitis S4  Bacteria  normal  0.147176  n/a   
 
 
-
 
NC_007517  Gmet_0287  3-oxoacyl-(acyl carrier protein) synthase  25.35 
 
 		 378 aa  53.5  0.000005  Geobacter metallireducens GS-15  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008752  Aave_3787  hypothetical protein  29.9 
 
 		 366 aa  52.4  0.00001  Acidovorax citrulli AAC00-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008752  Aave_3482  hypothetical protein  25.86 
 
 		 373 aa  52  0.00002  Acidovorax citrulli AAC00-1  Bacteria  normal  0.913769  normal  0.218569 
 
 
-
 
NC_008752  Aave_2739  hypothetical protein  29.19 
 
 		 399 aa  44.3  0.003  Acidovorax citrulli AAC00-1  Bacteria  normal  0.0361199  normal  1 
 
 
-
 
NC_011353  ECH74115_1288  beta-ketoacyl synthase, C- domain protein  22.78 
 
 		 852 aa  42.7  0.008  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  1  normal  0.248551 
 
 
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