| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0538 |
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| Symbol | |
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| ID | 7972948 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 598395 |
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| End bp | 599516 |
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| Gene Length | 1122 bp |
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| Protein Length | 373 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644791141 |
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| Product | hypothetical protein |
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| Protein accession | YP_002942467 |
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| Protein GI | 239813557 |
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| COG category | [S] Function unknown |
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| COG ID | [COG5351] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGAACTGA TCAACGCCAC TCGCATGGTC GCCAGCTACA ACATGGGCCT GGAGCCCAGT
GGGCGGGAAT CGCTCGTGGT GGTCATCAAA GGTACCTTTC GCATGCCGCC GCCCGATGCG
CCCGCCGGTC ATTTCGCGTT GCACGAGGAA CAGGTGCCGC TCGTGATGGC CGATACCTTT
ACCGGCGAGC CGGGACTCTC CGCGCCGGTC TATGAGGTCG ACTTCGCGCC GCACAAGCAG
CGCTGCGACA TCCTGTTGCT GGGCAGCGCC TACGCACCGC AGGGGCGACC CGCCACGCGG
ATCGAGGCCG GTGTGCGCGC GGGCAATTGG AGCAAGAGCT TGGCGGTTGT CGGTCCGCGC
CACTGGGAAT GCGGGCCGCT GGGCGCTACG GCCTCGCCGC CCGGCGTGTT CGTGCAGCAG
CCGCTGTCGT ACGACGTTGC CTTTGGCGGC GCCGACCTCC GGCATGAAGA TCTGTCGGAA
CATGCTGCTT TCATGCCCAA CCCCGTGGGT CTTGGTTTCC ATAAGCACAT CCGCATGGAC
TGGGTCGACG GGACCCCATT GCCGCGCACG GAGGAAATCG GCCATGCGGT GCACGACCCG
GGCGGCAATT ACCGGCCAAT GGCCTTCGGC CCCGTGGGGC GCGGCTGGTC CACTCGGTCG
TGCTTCGCCG GTACCTACGA TGACGAGTGG CTGGACAAGC ACTTTCCGTT TCTGCCGCCG
GATTTCGATC CGCAGTACTT CCAGGCAGCG CCGATGGACC AGCAGGTACC GCTGGAGCTG
TTCCAGCAGG CACCGATCGA TGTGGTGCTC GGCAATCTCA CGCCAGAGGG CATCACGCGC
TTCACCATTC CGCATCTGGT GGCGCCGGTG CATGTATTTC CCAGACACGG GGCGCGCGAG
GACTACACAG CCACGCTCGA CACGGTGGTG ATCGAGCCCG ATGCGCAGCG CTTCACGCTG
TCGTGGCGAG TGACGAGGCC GCTCAAAAAG AGCCTGTTCG AGATCGCACA GGTGCTGGTT
GGGAAGAAGG GACGGGAGTG GTGGCAGCAG CGCGAGCAGG TCCCTTTCCC GATTCCGGTT
GTGATGATTC CGATGACCTC AGATGAGGTT GAAACCGAAT GA
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| Protein sequence | MELINATRMV ASYNMGLEPS GRESLVVVIK GTFRMPPPDA PAGHFALHEE QVPLVMADTF
TGEPGLSAPV YEVDFAPHKQ RCDILLLGSA YAPQGRPATR IEAGVRAGNW SKSLAVVGPR
HWECGPLGAT ASPPGVFVQQ PLSYDVAFGG ADLRHEDLSE HAAFMPNPVG LGFHKHIRMD
WVDGTPLPRT EEIGHAVHDP GGNYRPMAFG PVGRGWSTRS CFAGTYDDEW LDKHFPFLPP
DFDPQYFQAA PMDQQVPLEL FQQAPIDVVL GNLTPEGITR FTIPHLVAPV HVFPRHGARE
DYTATLDTVV IEPDAQRFTL SWRVTRPLKK SLFEIAQVLV GKKGREWWQQ REQVPFPIPV
VMIPMTSDEV ETE
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