| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0491 |
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| Symbol | |
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| ID | 7972901 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 531365 |
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| End bp | 532636 |
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| Gene Length | 1272 bp |
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| Protein Length | 423 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644791094 |
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| Product | sodium/hydrogen exchanger |
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| Protein accession | YP_002942420 |
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| Protein GI | 239813510 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0475] Kef-type K+ transport systems, membrane components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.931754 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATCTGA CGAATCTCAT CAACGATCTG CTGGGCTTCT GGTCCGAGTG GCTGCGCCCT
TCGGCCGGCC TGCCCACGGT GCTGTGGTCG CTGCTGCTGG CCGCGGCGGC GGCCTCCGGC
CACCTGGTGC AGCGCTACCT GGGCCTGCCC AAGGTGGTGG GCTATTCGAT GGTCGGCGCG
GTGGCCGGCC TGGCCGGTTT CGAAGGCGCG ATCTGGCCGC TGCGCGGCAT CAGCCTGTTC
CTGCTGGAGC TCGGCGCGGC CGTGGTGCTG TTCGAAGCCG GCGGCCGGCT GCCGCTGCGC
TGGTTCCGCC ACAACCCGAT GGTGCTGGTG CAGAGCCTGC TCGAGGCCAC GCTCACCTAC
TTCGGCGTGT TCTGGATGCT GCAGCTGCTG GGCCTGCCCG ATCCGGTGGC CAACCCCATC
GCGCTGATGG CCATCGTCGC CTCGCCGGCG GTGCTGAGCC GCGTGATCAT CGACACCCGC
GCCTCGGGGC CGGTGACCGA GCGCGCCATG ACGCTGGCCA CGCTCAACAC CTTCTATGCG
CTGGCGCTCG GCTATGCGCA GGCCGGCCTG ATCGAACGGG CGCCGCAGAC GCTGCTGCAG
AAGCTCTATC CGGTGGCGGT GGTGCTCGGC CTGTCGTTCG TGGTCGGCGC CATCCTCGCG
CTGGCGCTGC GCACGGCCCT GCGCTTCATG AGCCCGACGA GCGAGAACAC CTCGATCCTG
CTGCTCGCGC TCATTGCGGC CGCCAGCGCG CTCACGGCCC ACGTCGGCGG CTCGGCGCCG
CTGGCCGCGC TGATCGGCGG GGTGCTGCTC AAGACGCTGA ATCCCAAGCC CTGGGCCTGG
CAGCGGCAGC TCGGCACGGC CTCGTCGCTG CTCACCATGC TGATGTTCGT GCTGGTGTCG
ATCGTGGCGG CGCAGGCCGA CTGGACGCTG CCCGTGGCCA GCGTGGTGCT GGCCGTGATC
GGCATCCGCC TGTTCGCCAA GATCGCCGGC GTGGCCATTG CCAACCCGGG CAGCGGCGCG
AGCTGGAACC AGGCCTTCTG GGTGGGCTGC GCGATGTCGC CGCTGTCGTC GATCGCGCTG
CTCATCGCCT CCAACTTCAC CACCGCGTCG CCGCTGCTCG GCACCATGAT CACGCAGGTG
GCCCTGCCCT CGATTCTCCT GATGGAAGTG ATGGGCGCCG TGCTCGCCAC CGTGGCCATC
CACGCGGTGG GCGAAAGCTC GGTGCCCTGG ACGCCCCAGG CCTTCAGCAC CACGGAGGAC
ACGCAGCGAT GA
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| Protein sequence | MNLTNLINDL LGFWSEWLRP SAGLPTVLWS LLLAAAAASG HLVQRYLGLP KVVGYSMVGA
VAGLAGFEGA IWPLRGISLF LLELGAAVVL FEAGGRLPLR WFRHNPMVLV QSLLEATLTY
FGVFWMLQLL GLPDPVANPI ALMAIVASPA VLSRVIIDTR ASGPVTERAM TLATLNTFYA
LALGYAQAGL IERAPQTLLQ KLYPVAVVLG LSFVVGAILA LALRTALRFM SPTSENTSIL
LLALIAAASA LTAHVGGSAP LAALIGGVLL KTLNPKPWAW QRQLGTASSL LTMLMFVLVS
IVAAQADWTL PVASVVLAVI GIRLFAKIAG VAIANPGSGA SWNQAFWVGC AMSPLSSIAL
LIASNFTTAS PLLGTMITQV ALPSILLMEV MGAVLATVAI HAVGESSVPW TPQAFSTTED
TQR
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