Gene Vapar_0470 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_0470 
Symbol 
ID7970211 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand
Start bp512848 
End bp513429 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content68% 
IMG OID644791073 
ProductYceI family protein 
Protein accessionYP_002942399 
Protein GI239813489 
COG category[S] Function unknown 
COG ID[COG2353] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCGCA CCTCCCGTCT CTGTCTTGCG GCCGCCCTGG CGTTCGCCCC TCTCGCGCCC 
GCGCTCGCCG AGCCCGCCAC GGCCACCCGG CTGGTGGCGG ACAAGAGCCA GATCGCCTTC
GTGAGCAAGC AGATGGGCGT GCCGGTGGAA GGCACGTTCA AGAAGTTCGA TGCGCAGGTG
GCCTTCGACC CGCGCAAGCC CGAAGGCGGC ACGGTCGCAT TGCAGATCGA CACGGGCAGC
GCGTCGCTGG GCGTTCCGAT GAGCGACGCC GAACTGCCCA AGCCGCCGTG GTTCGATACG
GCGCATTTTC CGCAGGCCAG TTTCCAGTCG AGCGCGATCA AGGCGCTGGG CGACGGCCGC
TTCGAGATGG CGGGCAAGCT CACCATCAAG AACATCTCGC GCCCGATCAC GGTGCCGGTG
AGCATTGCGC CGGCCGGCGC CCACGCGGTG GCCAGCGGAA GCTTTACGAT CCAGCGGCTC
GACTACAAGG TGGGCGACGG CGAGTGGACC GACACCTCGG TGGTCGGCAA CGAGGTGCTG
GTTCGCTTCA AGTTCACGCT CGCGGGGTTT GGTCCGCTCT GA
 
Protein sequence
MKRTSRLCLA AALAFAPLAP ALAEPATATR LVADKSQIAF VSKQMGVPVE GTFKKFDAQV 
AFDPRKPEGG TVALQIDTGS ASLGVPMSDA ELPKPPWFDT AHFPQASFQS SAIKALGDGR
FEMAGKLTIK NISRPITVPV SIAPAGAHAV ASGSFTIQRL DYKVGDGEWT DTSVVGNEVL
VRFKFTLAGF GPL