Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_0470 |
Symbol | |
ID | 7970211 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | - |
Start bp | 512848 |
End bp | 513429 |
Gene Length | 582 bp |
Protein Length | 193 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644791073 |
Product | YceI family protein |
Protein accession | YP_002942399 |
Protein GI | 239813489 |
COG category | [S] Function unknown |
COG ID | [COG2353] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGCGCA CCTCCCGTCT CTGTCTTGCG GCCGCCCTGG CGTTCGCCCC TCTCGCGCCC GCGCTCGCCG AGCCCGCCAC GGCCACCCGG CTGGTGGCGG ACAAGAGCCA GATCGCCTTC GTGAGCAAGC AGATGGGCGT GCCGGTGGAA GGCACGTTCA AGAAGTTCGA TGCGCAGGTG GCCTTCGACC CGCGCAAGCC CGAAGGCGGC ACGGTCGCAT TGCAGATCGA CACGGGCAGC GCGTCGCTGG GCGTTCCGAT GAGCGACGCC GAACTGCCCA AGCCGCCGTG GTTCGATACG GCGCATTTTC CGCAGGCCAG TTTCCAGTCG AGCGCGATCA AGGCGCTGGG CGACGGCCGC TTCGAGATGG CGGGCAAGCT CACCATCAAG AACATCTCGC GCCCGATCAC GGTGCCGGTG AGCATTGCGC CGGCCGGCGC CCACGCGGTG GCCAGCGGAA GCTTTACGAT CCAGCGGCTC GACTACAAGG TGGGCGACGG CGAGTGGACC GACACCTCGG TGGTCGGCAA CGAGGTGCTG GTTCGCTTCA AGTTCACGCT CGCGGGGTTT GGTCCGCTCT GA
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Protein sequence | MKRTSRLCLA AALAFAPLAP ALAEPATATR LVADKSQIAF VSKQMGVPVE GTFKKFDAQV AFDPRKPEGG TVALQIDTGS ASLGVPMSDA ELPKPPWFDT AHFPQASFQS SAIKALGDGR FEMAGKLTIK NISRPITVPV SIAPAGAHAV ASGSFTIQRL DYKVGDGEWT DTSVVGNEVL VRFKFTLAGF GPL
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