Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_0455 |
Symbol | |
ID | 7970196 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 497074 |
End bp | 498015 |
Gene Length | 942 bp |
Protein Length | 313 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644791058 |
Product | pyruvate carboxyltransferase |
Protein accession | YP_002942384 |
Protein GI | 239813474 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACACCCC CCGACGTCCT CATCAGCGAG GTCGGCCCGC GCGACGGCCT GCAGTCGGTC AAGGCCACCA TGCCCACGGC GGACAAGCTG CGCTGGATCG ACGCGCTTCA CGCCGCCGGC GTGCGCGAGA TCGAGGTCGC CTCCTTCGTG CCCGCCAGAT TGCTGCCGCA GATGGCCGAC GCCGCCGAGG TGGTGCGCCA CGCCATCACC TTGCCCGGCC TCACCGTGAT GGCGCTGGTG CCCAACCGCA AGGGCGCGCA GGCGGCGCTC GAAGCGGGCG TGCACAAGCT CACGATGCCG GTTTCGGCCA GCGTGGCGCA CTCGCTTGCC AACGTGCGCA AGACGCCGAC CGAAATGGTC GAGGAAGTGC GCGCCATCTC CGAGCTGCGC CGCGCGATGG CGCCGCATGT GAGGCTCGAG GCCGGCATCT CCACCGCCTT CGGCTGCACG CTGCAGGGGC TGGTGCCGGA AGACGACGTG ATCCGCCTCG CCGCGCAGTG CATCGAGGCC GGCGCGGAAG AAGCGGGCCT TTCGGACACC GTCGGCTATG CCAACCCCGC GCAGGTGCGC CGGCTCTTCA GGCGCCTGCG CGCCGAGCTC GGCACGCACG CCGGCGCCGC CCACATGCAC AACACGCGCG GCCTCGGCAT CGCCAACTGC CTGGCCGCGT GGGACGAGGG CGTGCGCACC TTCGACGCCT CGCTCGGCGG CCTTGGCGGC TGCCCTTATG CGCCCGGCGC CTCGGGCAAC GCGGTCACCG AGGATCTCGT CTTCATGTTC GAGGCCATGG GCGTTCGCAC CGGCATCGAC ATCCAGAAGC TCATCGCGGC GCGCGCGCCG CTCATGGCCG GCCTGCCCGG CGAACCGGTC TACGGCATGA CGCCCGAAGC CGGCCTGCCC AAGGGCTTTG CCGTCCAACA GGAAACCACC CCACATGCCT GA
|
Protein sequence | MTPPDVLISE VGPRDGLQSV KATMPTADKL RWIDALHAAG VREIEVASFV PARLLPQMAD AAEVVRHAIT LPGLTVMALV PNRKGAQAAL EAGVHKLTMP VSASVAHSLA NVRKTPTEMV EEVRAISELR RAMAPHVRLE AGISTAFGCT LQGLVPEDDV IRLAAQCIEA GAEEAGLSDT VGYANPAQVR RLFRRLRAEL GTHAGAAHMH NTRGLGIANC LAAWDEGVRT FDASLGGLGG CPYAPGASGN AVTEDLVFMF EAMGVRTGID IQKLIAARAP LMAGLPGEPV YGMTPEAGLP KGFAVQQETT PHA
|
| |