| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0433 |
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| Symbol | |
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| ID | 7970174 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 472787 |
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| End bp | 474088 |
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| Gene Length | 1302 bp |
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| Protein Length | 433 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644791036 |
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| Product | PepSY-associated TM helix domain protein |
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| Protein accession | YP_002942362 |
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| Protein GI | 239813452 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3182] Uncharacterized iron-regulated membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCGCCC TTGCAACCGC CGTGCACCGC TGGGCGGGAC TGGCGGTGGC CCTGTTCCTC
GTCGTCTCGG GGCTGACCGG CGCCGTCATC TCGTGGGACC ACGAGATCGA CGGCTGGCTC
AACCGCAAGC TCTACGACAC CGCGAGCCGC GGCCCCTTCA AGGACCCGTT CGAGCTTGCC
GCCGCGGTCG AGGCGCACGA TCCGCGCGCG CGGGTCGCCT ATCTTCCGCT GGGTTTCGAG
GAAGGCCACG CCGCCGGCTA CTTCGTGCAG CCGCGCACCG ACCCGGCCAC CGGCAAGCCC
TTCAGGCTCG GCTACAACCA GGTGTTCGTC GACCCGGTGA CGGCCGAGGT GCGCGGCCGC
CGCGACTCGA CCGCGATCTC GCTCAAGCCC GAGACGCTGA TGCCCTTCCT GCGCAAGCTG
CACTACATGC TGCACGTGCC GGCGATGTGG GGCACCGACC GGCTGGGCTA CTGGATCATG
GGCACGGTGG CGCTGGTGTG GCTGCTCGAC AGCTTCGTCG CGCTCTACCT CACGACGCCG
CGCCGGCTGC GCCAGGCAGT GCATCCGGCG CACCGGCCCG CGGGCGCCTG GTGGCAGCGC
TGGAAGCCGG CCTGGACGGT GCGCTGGGCG GCCGGCGGCT ACCGGCTCAA CTTCGACCTG
CACCGCGCGG GCGGGCTGTG GATGTGGCTG CTGATCATCG TCATCGCCTT CACCTCGTTC
TCGCTGAACC TCTACAAGGA GGTGTTCCAT CCGATGCTCT CGCTGGTGTC GAAGACCACG
CCGGGACCGT CGGCGCTGGT GCCGCTCGCG CCGCTGGGCA CGCGCATCGA GCCCGCCATC
GGCTTTCGCG AGATCGTGGC GCAGGCCGAT GCCGAGGCGC GGCGCCGCGG CTGGACCACG
CCGCTGGGCG GCGTGTTCTA CAACGCGCGC GGCGGCTTCT ACAACATCTC GTTCTTCGAC
CGCGCCTCGC ACGACGACAG CGACGGCATG GGCCTGTCGA ACCTCTACCT CGACGGGCGC
GACGGCCACC TGATCGGCAG CAACCGGCCG TGGCACGGCA CGGCGGCCGA CGTGTTCGCG
CAGCTGCAGC TGCCGCTGCA TGGCGGGCGC ATCCTCGGGC TGCCGGGGCG CATCCTGATG
TCGGCCATGG GCCTTGCGGT GGCGATGCTG TCGATCACGG GCATCGTGAT CTGGGGGCGC
AAGCTGCGCT CGCGGCGGCT GCAGGACCGG CGCCAGCGCG AACCGGCCGG CGCGGCCCCG
GCGCTCAGGC AGGGCGCAGG GTTTTCTCCA GCGCGTCGAT GA
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| Protein sequence | MRALATAVHR WAGLAVALFL VVSGLTGAVI SWDHEIDGWL NRKLYDTASR GPFKDPFELA
AAVEAHDPRA RVAYLPLGFE EGHAAGYFVQ PRTDPATGKP FRLGYNQVFV DPVTAEVRGR
RDSTAISLKP ETLMPFLRKL HYMLHVPAMW GTDRLGYWIM GTVALVWLLD SFVALYLTTP
RRLRQAVHPA HRPAGAWWQR WKPAWTVRWA AGGYRLNFDL HRAGGLWMWL LIIVIAFTSF
SLNLYKEVFH PMLSLVSKTT PGPSALVPLA PLGTRIEPAI GFREIVAQAD AEARRRGWTT
PLGGVFYNAR GGFYNISFFD RASHDDSDGM GLSNLYLDGR DGHLIGSNRP WHGTAADVFA
QLQLPLHGGR ILGLPGRILM SAMGLAVAML SITGIVIWGR KLRSRRLQDR RQREPAGAAP
ALRQGAGFSP ARR
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