Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_0375 |
Symbol | |
ID | 7973519 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 405707 |
End bp | 407470 |
Gene Length | 1764 bp |
Protein Length | 587 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644790978 |
Product | FAD dependent oxidoreductase |
Protein accession | YP_002942304 |
Protein GI | 239813394 |
COG category | [C] Energy production and conversion |
COG ID | [COG0578] Glycerol-3-phosphate dehydrogenase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGCCT GGCAACTTCC CTTCGTGCGC CCGGCCTCGC TCGCGGGCCG CCATTTCTCT ACCGTGATCG TGGGCGCCGG CATCAACGGC GTGGGCGTGT TCCGCGACCT GTCGCTGCAG CGCGTCGACT GCCTGATCGT CGACAAGGGC GACTTCGGCG CCGGCGCCAG CAGCGCGCCT TCGCGCATGA TCCACGGCGG CCTGCGCTAC CTGGAGAACG GCAGCTTCTC GCTGGTGGCC GAAGCCACGC GCGAGCGCAA CCTGCTGCTG CGCAATGCGC CGCACCTGGT GCGGCCGCTC AAGACGGTGG TGCCGCTCGC GAGCTTCTTC GGCGGCCTGA TGAGCAGCGC GCTCAAGTTC TTCGGCCGCA CGCCGCCGCA GCGCACGCGC GGCCTGCTGG CCGTGGCGCT GGGCCTGCGG CTCTACGACA TCCTGGGACG CCGCCAGCGC GTGATGCCGG GGCACCGCAT CAGCCGCGTG CCGCTGGCCG ACCGCAGCCT GTTCCGCGCG GCGATCCGCT GGACTGCCAC CTTCTTCGAT GCGTGGATCA GCCACCCCGA ATGGCTCATC CTCGAGCTGA TAGCCGACGC CTGCCGCGAC CAGCCGCGCT CCGCGGCCGC CAACTACTGC CGCGTGACGG GCTGCGCGGG CAACATCCTC ACCTTGCGCG ACGAGATCAC CGGCGCACTC GTGCGCGTGA CCGCCGACAC GGTGGTGAAC GCCACCGGCG CCTGGCTCGA CCGCAGCGCG GCCGTGCTCG GCGGCGCCGG CCCGCGCGTG ATGGGAACCA AGGGTTCGCA CCTCGTGCTC GACCATCCCG CGCTGCGCGA CGCGCTCGAC GGCCGCATGG CCTACTTCGA GGCGGTCGAC GGGCGCGTGT GCATCGTCTA TCCGTTCCTG GACCGCGTGC TGGTGGGCTC CACCGACATC CCGGTCGAAG ACCCGGACCA GATCGTCACC GAGCCGGCCG AGGTCGACTA CCTGATCGAC GTGCTGCGCG AGGTCTTCCC CAACATGGCC TTCGGCCGCG GCGACGTGGT CTACACCTAC GTCGGCGTGC GGCCGCTCGC GCGTTCGGAG GCCGACAAGC CGGGCCAGAT CTCGCGCGAC CATTCGGTGG TGGTCGATCC GCCGAACGCG ACACGCGACA TTGCCATCGT CGGCCTCGTC GGCGGCAAGT GGACCACCTT CCGCTCGCTG GCCGAGGAGG CCACCAATGA GGTGCTGCAG CTGCTCGGCC GCTCGCGCAC CGCATCGACC GAGCTGCTGC CCATCGGCGG GGGCGCGGAA CTGCCGGCCG ATGCGCCGGC GGCCGATCGC TTCGTCGAGA AGATGATGGC GGCCTGCGGC ATGGACCGCA GGCGCGCACT GACCCTGCTC GGCCGCTATG GCTCGAAGGC GTTGCCGCTC GCGCAGCGCC TCGCGGCCTC GGGCGATGTG CCGCTGCAGC ATGCGCCCGA TTACTCGGCC GCCGAGCTTT CCTACCTGTG CCTGGAGACC GGCGTGCTGC ACCTGGACGA CCTCGTGATC CGCCGCACGC TGCTGGCCAT TCGCGGCCTC GTCACCGACG CCGCGCTTGC CGAGATCGCG GGCGTGGCGG CCGAGGCGCT GGGCTGGGAC GCCACCCACG CCCACAACGA GCTGTGCGCT TGCGCCACCG CGCTGCGCGA GCGGCACAAC GTGCGGCTGC ACGCGGTGGC GGCCGGCGAG GCACCTTCTT TCGATGCATC ATTGATGGCC AGCTCAGTCC TCGGCCAAGC CTAA
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Protein sequence | MSAWQLPFVR PASLAGRHFS TVIVGAGING VGVFRDLSLQ RVDCLIVDKG DFGAGASSAP SRMIHGGLRY LENGSFSLVA EATRERNLLL RNAPHLVRPL KTVVPLASFF GGLMSSALKF FGRTPPQRTR GLLAVALGLR LYDILGRRQR VMPGHRISRV PLADRSLFRA AIRWTATFFD AWISHPEWLI LELIADACRD QPRSAAANYC RVTGCAGNIL TLRDEITGAL VRVTADTVVN ATGAWLDRSA AVLGGAGPRV MGTKGSHLVL DHPALRDALD GRMAYFEAVD GRVCIVYPFL DRVLVGSTDI PVEDPDQIVT EPAEVDYLID VLREVFPNMA FGRGDVVYTY VGVRPLARSE ADKPGQISRD HSVVVDPPNA TRDIAIVGLV GGKWTTFRSL AEEATNEVLQ LLGRSRTAST ELLPIGGGAE LPADAPAADR FVEKMMAACG MDRRRALTLL GRYGSKALPL AQRLAASGDV PLQHAPDYSA AELSYLCLET GVLHLDDLVI RRTLLAIRGL VTDAALAEIA GVAAEALGWD ATHAHNELCA CATALRERHN VRLHAVAAGE APSFDASLMA SSVLGQA
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