Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_0371 |
Symbol | |
ID | 7973515 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | - |
Start bp | 400464 |
End bp | 401480 |
Gene Length | 1017 bp |
Protein Length | 338 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644790974 |
Product | inner-membrane translocator |
Protein accession | YP_002942300 |
Protein GI | 239813390 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACTACC CGGCACAACT CGATGCGGGC CTGGCACCGC GCCCATCGGG AGGCGGCCCC GTGAAGCCCG CCAGCAAGCT CACCAGCATG CGCGAGATGG GCCTGCTGCT GATCATTGCG GTGCTGTGCG TGGCGATGAG CTTCGCATCG CCCTACTTCC TCACCTGGGA CAACGTGCGC GCCATGCTGC TGTCCTTCTC GATCGAAGGC ATCGTGGTGG TGGGCATGAC CATTTTGCTG ATCGTCGGCG GCATCGACTT GTCGGTGGGC TCGGTGGTCT GCTTCGCGAT GGTGGTCACG GGCAAGCTGT TCCTGATGGG CGTGGACCCA TGGATCGCGA GCCTGGTGGC CATCGGTGCG AGCGGACTGG TCGGCGCGAT GATCGGCGGC TGCGTCACGC GCATCGGGCT CAACCACTTC ATCGCCTCGC TGGCCTTCAT GGTGATCGTG CGCGGGCTGT GCCTGGCGCT CACGCAGGGC ACGCCGCAGT CGCTGTTCTC GCTGCCGGCG GAGTTCAAGT TCATCGGGCA GGGCACGCTG TTCGGCGTTC CGGCCGTGAT CCTGATCTTC GTGGCGATCG TCGTGGTGAG CGACTTCGTG CTGCGCCGCT CGACCTTGCT GCGGCGCGTG TTCTACACCG GCAGCAACGA GAAGGCCGCG CTGTACTCGG GCATCCGCGT GGGGCGCGTG AAGTTCTGGG TCACGGTGCT GTGTTCCGCA TCGGCGGGCC TGGCCGGCGT GATCTACACG GCGCGCTTCG GCGCGGCCAC GCCCACCTTC GGCGTGGGCA TGGAGCTCAA CGTGATTGCC GCCGCGGTGA TCGGCGGCGC GAGTCTCAAG GGCGGCTCCG GCACCGTGCT GGGCGCGGTG CTGGGCCTGG CGCTGCTCTC GGTGGTGACC AGTTCGCTGA TCCTGCTCGA CGTGTCGCCC TACTGGCAGG ACGTGATCAA GGGCCTCATC TTGCTCGCGG CCGTGACCAT CGACCACCTC CTGAACACGA GAAAGACGAC GCGATGA
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Protein sequence | MNYPAQLDAG LAPRPSGGGP VKPASKLTSM REMGLLLIIA VLCVAMSFAS PYFLTWDNVR AMLLSFSIEG IVVVGMTILL IVGGIDLSVG SVVCFAMVVT GKLFLMGVDP WIASLVAIGA SGLVGAMIGG CVTRIGLNHF IASLAFMVIV RGLCLALTQG TPQSLFSLPA EFKFIGQGTL FGVPAVILIF VAIVVVSDFV LRRSTLLRRV FYTGSNEKAA LYSGIRVGRV KFWVTVLCSA SAGLAGVIYT ARFGAATPTF GVGMELNVIA AAVIGGASLK GGSGTVLGAV LGLALLSVVT SSLILLDVSP YWQDVIKGLI LLAAVTIDHL LNTRKTTR
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