| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0340 |
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| Symbol | |
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| ID | 7973484 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 365789 |
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| End bp | 367315 |
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| Gene Length | 1527 bp |
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| Protein Length | 508 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644790943 |
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| Product | Xylulokinase |
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| Protein accession | YP_002942269 |
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| Protein GI | 239813359 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1070] Sugar (pentulose and hexulose) kinases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.769341 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATACG TGATCGGCGT CGACATCGGC ACGCAGAGCA CCAAGTGCCT GCTGGCCGGC
ACCGACGGCA AGGTGCATGC GCAGGCGAGC GTGGCCTACC AGCCCGACAC GCCGAAGCCG
CTGTGGGCGC AGCAGGACTG CGATGTGTGG TTCGACGCGG TGTGCGAGAG CGTGCGCGCC
TGCGTGGCGA AGAGCGGCAT CGCGGCAACG GAGATCGCCG CGATGTGCGT GAGCAGCCTG
TACGGCGGCG CGGGCGTCCC GGTCGACGAG GCGATGCAGC CGCTGCACCC CTGCCTGATC
TGGATGGACC GCCGCGCCAC CGCCGAGGTC GATGCGGTGA ACGCGAACGT CGACGTCGCG
CGCCTGCAGG CGATCACCGG CAACGGCGTC GACAGCTACT ACGGCTTCAC CAAGATGCTG
TGGATCCGCG AGCACCTGCC CGAGGTGTGG GCGAAGACGC GCTGGTTCCT GCCGCCCAAC
AGCTACGTCA ACTGGCGCCT GAGCGGCGAG CTCGCGGTGG ACCACAGTTC GGCCGGCAAC
ATCGGCGGCG TGTACGACGC GGCGCAGCGC AGCTGGTCCC ACGAGGCACT CGGCATGCTG
GGCATTCCGG CGCGCATGAT GCCGCCGCGC CTGGTCGAAT CGAGCGAGGT GGTGGGCGGC
CTGAGCGCCG AATGGGCCGC GAAGCTCGGC CTCGCCGAAG GCATGCCGCT GATGGGCGGC
GGCGTCGATG CGGCCGTGGC CACCTTCTGT GCGGGCGTCA CCGGCAGCGG CGACCACGTG
GCGATGATCG GCACCAGCAT GTGCTGGGGC TTCGTGAGCC CCACGGTGGA TGCGCGCCAC
AAACTCATCA CGATGCCGCA CGTCTACCGC GGCGCCGACC GCAGTTATGT GTTCGGCGGC
GCGATCACCG CGGGCGCGGC CGTCACCTGG TTCCGCGAGG CCTTCTGCCA GGCCGAGGTG
GCCGAGGCCG CGCGCACCGG CGAGGATGCG CACGCACTGA TCGAGCGCAA GGCCATCGAG
GTGCCACCCG GCGCCGAGGG CCTGGTCTTC CTGCCCTACC TGATGGGCGA GCGCAGCCCG
ATCTGGGACG CGCAGGCCAA GGGCGCCTTC ATCGGCCTCT CGCTCGCGCA CAGCCGCGCC
CATCTGTACC GCGCAGTGCT CGAAGGCGTG AGCTTTGCGC TGCAGCACAA CATCGAGGCC
GGACGGCAAA GCGGCCAGCC GCTGGACGAC CGGCTGATCG TGGTCGGGGG CGCGGCGCAT
TCGGACCTGT GGATGCAGAT CGTGGCGGAC GTCACGGGCT ACCCGGTGTT CACCATCGAG
GAAGAGGTCG AGGCGGCATT GGGTGCGGCG ATGCTCGCGG CGCTCGGCGC GGGGCTGGTC
GATGCAGCCA GTGCCGAACG CGGCTGGGTC ACGCTGGTGG AACGCGCGCG GCCCGGGGCT
GCGGCGCAAG CTGTTTATCG CGAGCGCTTC GAGATCTACA AGTCGCTTTA TCCGGCATTG
CGTGATGCGA TGCATCGGCT GAAATGA
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| Protein sequence | MKYVIGVDIG TQSTKCLLAG TDGKVHAQAS VAYQPDTPKP LWAQQDCDVW FDAVCESVRA
CVAKSGIAAT EIAAMCVSSL YGGAGVPVDE AMQPLHPCLI WMDRRATAEV DAVNANVDVA
RLQAITGNGV DSYYGFTKML WIREHLPEVW AKTRWFLPPN SYVNWRLSGE LAVDHSSAGN
IGGVYDAAQR SWSHEALGML GIPARMMPPR LVESSEVVGG LSAEWAAKLG LAEGMPLMGG
GVDAAVATFC AGVTGSGDHV AMIGTSMCWG FVSPTVDARH KLITMPHVYR GADRSYVFGG
AITAGAAVTW FREAFCQAEV AEAARTGEDA HALIERKAIE VPPGAEGLVF LPYLMGERSP
IWDAQAKGAF IGLSLAHSRA HLYRAVLEGV SFALQHNIEA GRQSGQPLDD RLIVVGGAAH
SDLWMQIVAD VTGYPVFTIE EEVEAALGAA MLAALGAGLV DAASAERGWV TLVERARPGA
AAQAVYRERF EIYKSLYPAL RDAMHRLK
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