| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0311 |
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| Symbol | |
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| ID | 7972660 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 333183 |
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| End bp | 334088 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644790914 |
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| Product | extracellular solute-binding protein family 3 |
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| Protein accession | YP_002942240 |
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| Protein GI | 239813330 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGATGC AATTGAAGAC CCTCGCCATC GCTGCCGCGC TGCTCGCGCT CGCCTTCGGC
GCCGCCGCGC AGCAGGCCCC GGCCGGCGGC ACGCTCGACA AGATCAGGAG CAGCGGAAAG
GCGGTGCTCG GCGTGCGCGA AGCCTCGCCG CCCATGGCCT ACATGCTGGG CGCGAACGAG
AAATACGTGG GCTACCACGT CGAGCTGTGC GAGCGCGTGC TGAAGGACAT CGCGCCGCAG
GCCAAGCTCG AATACATGGC CGTCACCGCG CAGAACACCA TCCCGCTGGT GCAGAACGGC
ACCCTCGACA TCGGCTGCGG CCCGACCACC AACAACACCG CGCGCCAGCA GCAGGTGGCG
TTCGCGCTCA CCACCTACGT GAGCGAGGTG CGCATGGCCA CGCGCGTCGA TTCGGGCATC
AGCTCGCTCG ACCAATTGGC GGGCCGCACC GTGTCGGCCT CCACCGGCAC CACCGCCGTG
CAGCTGCTGC GCAAGCGCGA GCGCGCGCAG AACACCACCA TCACCACCAT GCTCGGCAAG
GACCACCTCG AAAGCTTTTT GCTGATGGAG TCGGGCCGCG CCGATGCCTT CGTGCTCGAC
GACAACCTGC TCGCGGGCAT CATCGCGAAC GCGAAGAATC CGTCGGCCTA CCGCATCGTC
GGCGATGCGC TGGGCTCCGA GCCCATCGCG CTGCTGTTCC GCAAGGACGA TGCCATCTTC
AAGGCCGCGG TGGACGATGC GCTGCGCCGC CTCATGAAGA GCGGCGAGCT CGAGAAGATC
TACACCAAGT GGTTCGTCGC GCCGATTCCG CCGAAGAACA CCAGCCTGAA CCTGCCGATG
AGCGCGGCGC TGAAACAGCT CATTGCCGAG CCCAACGACA AGCCGCTGGA GGCCTACGCC
AAGTGA
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| Protein sequence | MKMQLKTLAI AAALLALAFG AAAQQAPAGG TLDKIRSSGK AVLGVREASP PMAYMLGANE
KYVGYHVELC ERVLKDIAPQ AKLEYMAVTA QNTIPLVQNG TLDIGCGPTT NNTARQQQVA
FALTTYVSEV RMATRVDSGI SSLDQLAGRT VSASTGTTAV QLLRKRERAQ NTTITTMLGK
DHLESFLLME SGRADAFVLD DNLLAGIIAN AKNPSAYRIV GDALGSEPIA LLFRKDDAIF
KAAVDDALRR LMKSGELEKI YTKWFVAPIP PKNTSLNLPM SAALKQLIAE PNDKPLEAYA
K
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