| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0309 |
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| Symbol | |
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| ID | 7972658 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 330521 |
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| End bp | 331381 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644790912 |
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| Product | transcriptional regulator, IclR family |
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| Protein accession | YP_002942238 |
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| Protein GI | 239813328 |
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| COG category | [K] Transcription |
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| COG ID | [COG1414] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAACCC TCTCGGCCGC CAGCGGCGGC GTGCCGCGCG TCTTTTCGGT GATCCGCGCA
CTCGGCGCGG TGCAGGCCGA GGGCGGGCGC GTGACCCAGA TTGCACGGTC CGTGGGCCTC
ACGCAGGCCA CCACGCACCG CCTTTTGCAG TCGCTCATGG CCGAAGGCAT GGTCGAGCAG
GACGAGCGCA GCAAGCTCTA CCGACTGAGC ATCGACTTCT TCGCGCTCGC GGCCAGCGCC
GGCAATCCCG GCGACCTGCG TTCGATCTGC CGCCCGGTGC TGCTGCGCCT GTGCGCGAGC
CTGGGCGACA GCATCTTTTT GCTGGCGCGC AGCGGCTTCG ACGCGATCTG CCTCGACCGC
AGCGAAGGGC CGTTTCCCAT CCGCTCGTTC ACGGGCGACA TCGGCGGGCG CATCGCGCTG
GGCGTGGGGC AGGGCGCGCT CGCGATCCTG GCCTTCCTTC CCGAGGCGGA GCGCGAAGAG
GTGATCCGCT TCAATCTCTC GCGTGTGCGC GAGTACGGCG TGTACGACGA GGTGTATCTG
CGCACCGAAA TCGAGCGCGT GCGCCAGGCC GGCTATGCGG GGCGCAACAC CGGCCTGCTC
GAAGGCATGG CCGGCGTGGC CGTGCCCATC CTCGACCGCG AGGGCCGCGC GGTGGCCGCG
CTCAGTGTGG GAACCATCGC CGACCGGCTC AATGCCGACC GCATGCCCAC GGTGGTCGAG
CTGCTCAAGC GCGAGGCGGC AGCCATCGGG CCGAAGATCA ATCCCTTCGA CGCCACCTTG
CGGCGGCCGG CGCAGAGCCT CGCGGGTTCG CCGGCCGGGC AGCGCATCAG CCTGCCCGAG
CCGCCGGGGC CTGCGGCTTG A
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| Protein sequence | METLSAASGG VPRVFSVIRA LGAVQAEGGR VTQIARSVGL TQATTHRLLQ SLMAEGMVEQ
DERSKLYRLS IDFFALAASA GNPGDLRSIC RPVLLRLCAS LGDSIFLLAR SGFDAICLDR
SEGPFPIRSF TGDIGGRIAL GVGQGALAIL AFLPEAEREE VIRFNLSRVR EYGVYDEVYL
RTEIERVRQA GYAGRNTGLL EGMAGVAVPI LDREGRAVAA LSVGTIADRL NADRMPTVVE
LLKREAAAIG PKINPFDATL RRPAQSLAGS PAGQRISLPE PPGPAA
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