| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0259 |
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| Symbol | |
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| ID | 7972608 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 278661 |
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| End bp | 279383 |
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| Gene Length | 723 bp |
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| Protein Length | 240 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644790862 |
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| Product | two component transcriptional regulator, winged helix family |
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| Protein accession | YP_002942188 |
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| Protein GI | 239813278 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCGCA TGAGTACCCC CCAGCTCCTG ATGATCGAAG ACGACGCCCG CCTGGCACAG
ATGGTGGGCG AATACCTGAC GCAGTCGGGA TTCCTCTTCA CCCATGCCGG CGACGGCGCG
AGCGGCCTCG AGCAGTTGCA GCAGCACGCG CCCGACCTCG TGATCCTCGA CCTGATGCTG
CCCGACACCG ACGGCCTGGA GATCTGCCGC CGCATCCGCT CGCTGCCGCC TCCGGCTTCG
AAGGTGTCGG TGCTGATGCT CACCGCCAAG GGCGATCCGA TGGACCGCAT CATCGGCCTG
GAGATCGGCG CCGACGACTA CCTGCCCAAG CCCTTCGAGC CGCGCGAGCT GCTCGCGCGC
ATCCGCGCGG TGCTGCGCCG GCGCAGCGAG AACAATGCCG ACACCGAAGC CAGCACCGTG
ATGCGCTTCG GCACGCTCGA GATCGACCGC AACGCGCGCA CCGTGTCGGT GGGCGGCGCG
CTGGCCGACC TCACCTCCTA CCAGTTCGAC CTGCTGGTGG CCATGGCCGA GCGCGCCGGC
CGCGTGCTCA CGCGCGACCA GATCATGGAG GCCGTGCGCG GCCGCGAGCT CGAGGCCTTC
GACCGCTCGA TCGACGTGCA CATGGGCCGC ATCCGCGCCG CCATCGAGGT GGACGCCAAG
AACCCCAAGC GCATCCTCAC GGTGCGCGGC GTGGGCTACG TGTTCGCCAA GCAGCAGGAC
TGA
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| Protein sequence | MKRMSTPQLL MIEDDARLAQ MVGEYLTQSG FLFTHAGDGA SGLEQLQQHA PDLVILDLML
PDTDGLEICR RIRSLPPPAS KVSVLMLTAK GDPMDRIIGL EIGADDYLPK PFEPRELLAR
IRAVLRRRSE NNADTEASTV MRFGTLEIDR NARTVSVGGA LADLTSYQFD LLVAMAERAG
RVLTRDQIME AVRGRELEAF DRSIDVHMGR IRAAIEVDAK NPKRILTVRG VGYVFAKQQD
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