Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_0242 |
Symbol | |
ID | 7971451 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | - |
Start bp | 258018 |
End bp | 258893 |
Gene Length | 876 bp |
Protein Length | 291 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644790845 |
Product | 3,4-dihydroxyphenylacetate 2,3-dioxygenase |
Protein accession | YP_002942171 |
Protein GI | 239813261 |
COG category | [S] Function unknown |
COG ID | [COG3384] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR02298] 3,4-dihydroxyphenylacetate 2,3-dioxygenase |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.393613 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGCACCC TCGCACTCGC CGCCAAGATC ACGCATGTGC CGTCGATGTA CCTCTCGGAG TTCCCGGGAC CGAACTTCGG CTGCCGCGAC GCGGCGATCA ACGGCCACAA GGAAATCGAC CGGCGCTGCC GCGCGCTGGG CGTGGACACC ATCGTGGTGT TCGACGTGCA CTGGCAGGTC AACAGCGAAT ACCACATCAA CTGCGGCCCG AAGTTCGGCG GCACCTACAC CAGCAACGAG CTGCCGCACT TCATCAAGAA CATGCCGTAC GCCTACCCGG GCAACCCGGC TCTGGGCCAC CTGATTGCCG ACGTGGCGAA CGAAATGGGC GTGAAGAGCC GCGCGCACAG CGACACCACG CTCGAACTCG AATACGGCAC GCTGGTGCCC ATGCGCTACA TGAACGCCGA CCAGCACTAC AAGGTGATCA GCATCAGCGG CTGGTGCGAC TGGCACGACC TCACGGAGTC GGGCCGCTTC GGCCTGGCGG TGCGGCGCGC GATCGAGGAG CGCTACGAGG GCACGGTGGC GGTGTTCGCG AGCGGTTCGC TCTCGCACCA CTTCGCGGAC AACGGCCGCG CCCCCGAATT CATGCACAAG GTCTACGATC CCTTCCTCGA GCAGGTGGAC CGCCGCGTGG TCGAGCTCTG GGAGGCCGGC GACTGGAAGA CCTTCGTCGG CATGCTGCCG ATGTACGCCG ACAAGTGCTG GGGCGAAGGC GACATGCACG ACACCGCGAT GCTGCTGGGC CTCCTGGGTT GGGACCGCTA CGCCGCGCCG GTGGAAGTGG TCACGCCCTA TTTCGGGAGC TCGGGCACGG GGCAGATCAA TGCGATCTTT CCCGTGACGC CACTGCCTGC GGAAACCACC ACCTGA
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Protein sequence | MGTLALAAKI THVPSMYLSE FPGPNFGCRD AAINGHKEID RRCRALGVDT IVVFDVHWQV NSEYHINCGP KFGGTYTSNE LPHFIKNMPY AYPGNPALGH LIADVANEMG VKSRAHSDTT LELEYGTLVP MRYMNADQHY KVISISGWCD WHDLTESGRF GLAVRRAIEE RYEGTVAVFA SGSLSHHFAD NGRAPEFMHK VYDPFLEQVD RRVVELWEAG DWKTFVGMLP MYADKCWGEG DMHDTAMLLG LLGWDRYAAP VEVVTPYFGS SGTGQINAIF PVTPLPAETT T
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