| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0186 |
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| Symbol | |
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| ID | 7971395 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 190885 |
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| End bp | 191619 |
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| Gene Length | 735 bp |
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| Protein Length | 244 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644790789 |
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| Product | ABC transporter related |
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| Protein accession | YP_002942115 |
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| Protein GI | 239813205 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGCACGC ACGAAACACT GTTGAAGGCG AACTCGCTGT GCGCCTGGTA CGGCGCCGCA
CAGATCCTCT ACGACGTCGA TCTTGAAGTG CAGCGCGGCG AGGTCGTCGC GCTCATGGGG
CGCAACGGCG CGGGCAAGTC GACCACGCTC AAGACGCTGA TCGGCATGCT CGCCAAGCGC
AAGGGCAGCG TCAGCTTCCT CGGCCACGAC ATCTCGAAGA GCGAGCCTCA TCACGCGGCG
AAGCTCGGCC TCGGTTTCGT GCCCGAGGAC CGCCGCGTGT TCACCGATCT CACGGTGATG
GAGAACCTCG AAGTCGGCAA GCAGCCGCCG CGCCGCTGGG CTGACGGCAG CGAGGCGCCG
CTGTGGACGC CCGAGCGGCT GTTCAAGCTC TTTCCCAACC TGGGCGAAAT GCCCGACCGC
CCGGGCGGCC GCATGAGCGG CGGCGAGCAG CAGATGCTCA CCGTGGCGCG CACGCTCATG
GGCAATCCGT ACCTGGTGCT GCTCGACGAG CCCTCCGAAG GCGTGGCGCC GGTCATCGTC
GAGCAGATGG CCAACATGAT CCTCGAACTC AAGGCGCAGG GCGTGAGCAT CCTGCTGTCG
GAGCAGAACA TGCACTTTGC CGAGCTGGTA TCCGACCGCG CCTATGTGCT CGAGAAGGGC
CAGATCCGCT ACCACGCCAC CATGGCAGAG CTCGCGGCCA ACGAAGAGGT GCGCCGCGCC
TACCTGAGCG TCTAG
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| Protein sequence | MSTHETLLKA NSLCAWYGAA QILYDVDLEV QRGEVVALMG RNGAGKSTTL KTLIGMLAKR
KGSVSFLGHD ISKSEPHHAA KLGLGFVPED RRVFTDLTVM ENLEVGKQPP RRWADGSEAP
LWTPERLFKL FPNLGEMPDR PGGRMSGGEQ QMLTVARTLM GNPYLVLLDE PSEGVAPVIV
EQMANMILEL KAQGVSILLS EQNMHFAELV SDRAYVLEKG QIRYHATMAE LAANEEVRRA
YLSV
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