| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0158 |
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| Symbol | |
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| ID | 7971694 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 159557 |
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| End bp | 161110 |
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| Gene Length | 1554 bp |
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| Protein Length | 517 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644790761 |
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| Product | histidine ammonia-lyase |
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| Protein accession | YP_002942087 |
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| Protein GI | 239813177 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2986] Histidine ammonia-lyase |
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| TIGRFAM ID | [TIGR01225] histidine ammonia-lyase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCAACAA GCAAACACAC CGCCACCCCC TTGATCCTCA CGCCCGGCAA GGTGGACCTT
GCCATGCTGC GCCGCATCCA GGCCGGCGGC GTGCGGCTGG CGCTCGATCC TTCGGTGCAG
GAGGGCATGG CGCGCGCCGA AGCGGCTGTG CGCCACATCG TCGAGAACGA CCAGGTGGTC
TACGGCATCA ACACCGGCTT CGGCAAGCTC GCGAGCACGC GCATCGGCAA CGACCACCTG
GCCGAGCTGC AGCGCAACCT CGTGCTCTCG CACAGCGTGG GCACGGGCGA GCCGCTGGCC
GCGCCGGTGG TGCGCATGGT GCTCGCGACC AAGGCCGTGA GCCTGGCGCG CGGCCACTCG
GGCGTGCGGC CCGCGCTGGC CGAGGCGCTG CTGGCGCTGT TCAATGCGGG CGTCATGCCG
CGCATTCCGT GCAAGGGCTC GGTCGGCGCC TCGGGCGACC TCGCGCCGCT CGCGCACATG
GCCTGCGTGC TGATCGGCGA GGGCGAGGCC ACCACGGCCG ACGGCGCCGT GGTCAGCGGC
GCCGAAGCCA TGCGCCTCGT CGGCCTCGAA CCCTTTGTGC TCGGCCCCAA GGAAGGCCTG
GCGCTGCTCA ACGGCACGCA GGTGTCGACC GCGCTCGCGC TCGCCGGCCT GTTCGGCGCG
GAGGACGTGT TCGCTTCGGC GCTGATGTCG GGTGCGCTCT CGCTCGAAGC CATCCAGGGT
TCGATCAAGC CCTTCGATGC GCGCATCCAT GCCGCGCGCG GCCAGCCGGG GCAGATCGCG
GTGGCGGGCG CGGTGCGCAC GCTGCTCGAA GGCAGCGAGA TCGTCCCTTC GCACGCCGAC
TGCGGCCGCG TGCAGGACCC GTATTCGGTG CGCTGCATTC CGCAGGTGAT GGGCGCCTGC
CTCGACAACC TCGCGCATGC CGCGCGCGTG CTGGTGATCG AGGCCAATGC CGCCTCGGAC
AACCCGCTGG TGTTCACCGA CACCGGCGAA GTGATCTCGG GCGGCAACTT CCACGCCGAG
CCGGTGGCCT TTGCGGCCGA CATCATTGCG CTGGCAGTGA GCGAAGTGGG CGCGATTGCC
GAGCGCCGCA TCGCGCTGCT GCTCGACACC GGCCTGTCGG GCCTGCCGCC GTTCCTGGTG
CGCGATGGCG GCCTGAACTC GGGCTTCATG ATCGCGCAGG TCACGGCCGC GGCGCTGGCG
TCGGAGAACA AGTCGCTCGC GCATCCCGCG AGCGTCGACA GCCTGCCCAC TTCGGCCAAC
CAGGAAGACC ACGTGTCGAT GGCCACCTTC GCGGCGCGCC GGCTCGGCGA CATGGTCAAC
AACACGGCGG TGGTCGTCGG CATCGAGGCG ATGGCCGCGG CACAAGGCAT CGAACTCAAG
CGGGGGCTCA AGAGCTCCCC GCTGGTCGAA GCCGAATTCG CCGCCATCCG CCAGAAGGTC
GCTTTTCTCG AACGCGACCG CTACCTTGCG CCCGACATCG AAGCGATGCG CCAGTGGGCG
CTGAAGGCCG AGCTGCCGGC CGCGCTCTTG AACATCCTGC CCAGCCACGC CTGA
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| Protein sequence | MPTSKHTATP LILTPGKVDL AMLRRIQAGG VRLALDPSVQ EGMARAEAAV RHIVENDQVV
YGINTGFGKL ASTRIGNDHL AELQRNLVLS HSVGTGEPLA APVVRMVLAT KAVSLARGHS
GVRPALAEAL LALFNAGVMP RIPCKGSVGA SGDLAPLAHM ACVLIGEGEA TTADGAVVSG
AEAMRLVGLE PFVLGPKEGL ALLNGTQVST ALALAGLFGA EDVFASALMS GALSLEAIQG
SIKPFDARIH AARGQPGQIA VAGAVRTLLE GSEIVPSHAD CGRVQDPYSV RCIPQVMGAC
LDNLAHAARV LVIEANAASD NPLVFTDTGE VISGGNFHAE PVAFAADIIA LAVSEVGAIA
ERRIALLLDT GLSGLPPFLV RDGGLNSGFM IAQVTAAALA SENKSLAHPA SVDSLPTSAN
QEDHVSMATF AARRLGDMVN NTAVVVGIEA MAAAQGIELK RGLKSSPLVE AEFAAIRQKV
AFLERDRYLA PDIEAMRQWA LKAELPAALL NILPSHA
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