| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0135 |
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| Symbol | amiE |
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| ID | 7971671 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 134520 |
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| End bp | 135554 |
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| Gene Length | 1035 bp |
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| Protein Length | 344 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644790738 |
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| Product | acylamide amidohydrolase |
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| Protein accession | YP_002942064 |
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| Protein GI | 239813154 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0388] Predicted amidohydrolase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGACATG GTGATATTTC GAGCAGCAAT GATTGCGTGG GAGTCGCGGT CGTCAACTAC
AAGATGCCCC GCCTGCACAC CAAGGCCGAG GTGCTCGACA ACGCGCGCAA GATCGGCGAG
ATGCTGGTCG GCATGAAGAA GGGCCTGCCG GGCATGGACC TGGTGATCTT TCCCGAGTAT
TCGACGCACG GGATCATGTA CGACACCAAG GAGATGTACG ACACCGCCTC CGCGATCCCC
GGCGAGGAGA CCGCCATCTT TGCCGACGCC TGCCGCCGCG CCAATGTATG GGGCGTGTTC
TCGCTGACCG GCGAGCGCCA CGAGGCGCAT CCGGACAAGG CGCCCTACAA CACGCTGATC
CTCATGAACA ACCAGGGCGA GATCGTCCAG AAGTACCGCA AGATCATGCC GTGGGTGCCC
ATCGAGGGCT GGTACCCGGG CGACTGCACC TACGTGAGCG ACGGCCCCAA GGGCATGAAG
ATGAGCCTGA TCATCTGCGA CGACGGCAAC TACCCCGAGA TCTGGCGCGA CTGCGCGATG
CGCGGCGCCG AACTGATCAT CCGCTGCCAG GGCTACATGT ACCCGGCCAA GGAGCAGCAG
ATCCTGGTGT CCAAGGCCAT GGCCTTCATG AACAACACTT ACGTGGCGGT GGCCAATGCG
GCGGGCTTCG ACGGCGTGTA CTCGTACTTC GGGCACTCGG CCATCATCGG CTTCGACGGC
CGCACGCTCG GCGAATGCGG CGAGGAGGAA ATGGGCATCA ACTACGCCGA ACTCTCGATG
GGCCTGATCC GCGATGCGCG CAGGAACGGC CAGTCGCAGA ACCACCTGTT CAAGCTGATG
CACCGCGGCT ACACCGGCGT CATCCATTCG GGCGACGGCG ACAAGGGCGT GGCGGCCTGC
CCGTTCGACT TCTACAAGCA GTGGATCAAC GACCCCGAGG GCGCGCGCGA GCAGGTGGAG
TCGTTCACGC GCAGCACCAT CGGCACGGCG GAATGCCCGA TCGAGGGCCT GCCGAACGAA
GCTGCCCGCA GCTGA
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| Protein sequence | MRHGDISSSN DCVGVAVVNY KMPRLHTKAE VLDNARKIGE MLVGMKKGLP GMDLVIFPEY
STHGIMYDTK EMYDTASAIP GEETAIFADA CRRANVWGVF SLTGERHEAH PDKAPYNTLI
LMNNQGEIVQ KYRKIMPWVP IEGWYPGDCT YVSDGPKGMK MSLIICDDGN YPEIWRDCAM
RGAELIIRCQ GYMYPAKEQQ ILVSKAMAFM NNTYVAVANA AGFDGVYSYF GHSAIIGFDG
RTLGECGEEE MGINYAELSM GLIRDARRNG QSQNHLFKLM HRGYTGVIHS GDGDKGVAAC
PFDFYKQWIN DPEGAREQVE SFTRSTIGTA ECPIEGLPNE AARS
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