Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_0084 |
Symbol | |
ID | 7971619 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | - |
Start bp | 82075 |
End bp | 82821 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644790686 |
Product | ABC transporter related |
Protein accession | YP_002942013 |
Protein GI | 239813103 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGCAC TGCTTTCCGT CGAAGGCCTC ACCCGCCGCT TCGGCGGCCT CACAGCCGTC AATGCCATCA CGCTCGACCT GCACGTCGGC GAAGTCCATG CGGTGATCGG CACCAACGGC GCGGGCAAGT CGACGCTCAT CAACATGCTC TCGGGCGAGA TCGAAGCCTC CGAAGGCCGC ATCGCGCTCG ACGGCGTCGA CATCACGCGG CGCGCGCAGT GGCGCCGCGC GCGCGCGGGC GTGGGCCGCA GCTACCAGCG CACCACCATC TTCCCGGAGT TCAGCGTGCA CGAGAACTGC CGCCTCGCGG CGCAGGCCGC CACGGCGCGG CCCTGGACGG TGTGGCAGTC GTCCGGGCGC TGCGCGGCCA GCAATGCGGC GGCCGACGCG GCGCTCGAGG CCGCGGGCCT GTCGAACGAA GCGCTGCGCA TCGCCGGCAC GCTGAGCCAC GGCGCGCAGC GCCAGCTCGA AGTGGCGATG TGCCTTGCCA CCAGGCCCCG CGTGCTGCTG CTCGACGAGC CGCTCGCGGG CATGGGCGCC GAGGAAACCG ACCGCATGCT CACGCTGCTC GCGCGGCTGA AGGCCACGCA CGCGATCCTG CTGGTGGAGC ACGACATGGA TGCGGTGTTC CGCATTGCCG ACCGCATCAC GGTGATGGTG AACGGCACGG TCATCGCGAC CGGCGACCCT CGGTCGATCC GAGAGAACCC CGAAGTGCGT ACCGCCTACC TCGGAGAAGA CCACTGA
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Protein sequence | MTALLSVEGL TRRFGGLTAV NAITLDLHVG EVHAVIGTNG AGKSTLINML SGEIEASEGR IALDGVDITR RAQWRRARAG VGRSYQRTTI FPEFSVHENC RLAAQAATAR PWTVWQSSGR CAASNAAADA ALEAAGLSNE ALRIAGTLSH GAQRQLEVAM CLATRPRVLL LDEPLAGMGA EETDRMLTLL ARLKATHAIL LVEHDMDAVF RIADRITVMV NGTVIATGDP RSIRENPEVR TAYLGEDH
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